DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and Cfhr4

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001025148.3 Gene:Cfhr4 / 214403 MGIID:3646434 Length:879 Species:Mus musculus


Alignment Length:741 Identity:183/741 - (24%)
Similarity:279/741 - (37%) Gaps:182/741 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 KKFTLGEKIQYTCPKGHSLL-GQTERECRLDGTWSGSSPTCKYVDCGSLPELKFGSIHMSEERTS 485
            |.:..|:.::..|..|:||. ||....|..:| || ..|.|..:...|:.:::..:...||...:
Mouse   107 KIYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WS-PPPKCI
RIKTCSVSDIEIENGFFSESFRT 169

  Fly   486 FGV--VATYSCHENYTLIGNENR---TCAMDGWSGKQPECLVDWCPDPQPIAGGDV--------R 537
            :.:  ..:|.|.:.|.....|..   ||..:||| .||.|:.. |  .:|:....|        :
Mouse   170 YALNRETSYRCKQGYVTNTGETSGSITCLQNGWS-PQPSCIKS-C--ERPVFENSVTKNNSTWFK 230

  Fly   538 FNDKRAGSTATYVCEPGY---VLVGEAIISCGLGGEWSSKTPSCRFVDCGAPARPNRGIAILLNG 599
            .|||     ..|.|..||   ....:..|:|...| ||. ||||..::|..|....:.:......
Mouse   231 LNDK-----LDYECLIGYENEYKHTKGSITCTYYG-WSD-TPSCYEIECSVPILDRKLVVSPRKE 288

  Fly   600 TTTVNSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVC---ELVTC-ETPSVPSGSFVIG---Y 657
            ...|..::::.|...|.: |...:.|...| ||...|.|   ::.:| :.|.:|:|. :.|   .
Mouse   289 KYRVGDLLEFSCRSGHRV-GPDSVQCYHFG-WSPSFPTCKAGQVASCAQPPEIPNGE-INGAKRV 350

  Fly   658 DYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAPYC--EYIDCGTILPIPYGSHKYVTNTTY 720
            :|:....:.|:|.|..::.|...::|:| |.|:. .|.|  |...||.|..:.:||.|:.....:
Mouse   351 EYSHGEVVGYDCKPRFLLKGPNKIQCVD-GMWTT-LPVCVEEERTCGDIPELEHGSVKFSVPPYH 413

  Fly   721 VGSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPKC----------------------------- 756
            .|..|.|:|:::..:.|:....|| |..|:.. |||                             
Mouse   414 HGDSVEFTCAETFTMIGLGSVFCL-SGKWTQL-PKCVATDQLEKCRVLKSTDIEAIKPKRKEFQH 476

  Fly   757 -------------------------------EEIRCPEP-------------KLAAHSLLSVTGN 777
                                           .:|.||.|             |......|||...
Mouse   477 NSTMYYKCRDKQEYEHSICINGKWNPEPNCIRKISCPPPPQIPNTQVIETTVKYLDGEKLSVLCQ 541

  Fly   778 DRMY-----------GR------------------------TLIRTSESSQNTAQ--TYKIGALA 805
            |...           ||                        .|.||||..:.:.:  :::.|...
Mouse   542 DNYLTQDPEEMMCKDGRWQSLPHCIEKIPCSQPPTIEHGSIKLPRTSEKRRKSIEFSSHEHGTTF 606

  Fly   806 KYRCERGYKMVGEALATCTDSGQWSGTIPECVYVECGAPEGINNGKVVLATNATYYGAAVLYECN 870
            .|.|:.|:::..|....|. .|:|| |.|.||.:.||.|..|..|.|.|...:..:|..|.|.|:
Mouse   607 SYVCDDGFRIPEENGVACY-MGKWS-TPPRCVGLPCGPPPSIPLGTVSLELESYQHGEEVTYHCS 669

  Fly   871 VNFKLNGVSRRLCTEHGNWSHEAPECVEVVCDTPNINENLIVEAGPR---AVGSVATFKCAKGRI 932
            ..|.::|.:...| |.|.|| :.|:|::..||.....||.|:....:   ..|...|.:|.....
Mouse   670 TGFGIDGPALIKC-EGGKWS-DPPKCIKTDCDILPTIENAIIRGKNKKSYRTGEQVTVRCQSPYQ 732

  Fly   933 MMGNDTRVCQKNGKWTGKSPTCRPV--DCGRPLAIENGRVIVVNDSTLYG-------GSAEYHCI 988
            |.|:||..| .||:|.|| |.|:..  .||.|..|:||      |.|...       .|.:|.|.
Mouse   733 MNGSDTVTC-INGRWIGK-PVCKDSRGKCGPPPPIDNG------DITSLSLPEYEPFSSVDYQCQ 789

  Fly   989 PNYNRIGQYLRKCTEDGAWSGKQPRC 1014
            ..|...|:....| .:|.|| :.|.|
Mouse   790 KYYLLKGKKTITC-RNGKWS-EPPTC 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057
CCP 408..462 CDD:153056 13/40 (33%)
CCP 466..520 CDD:153056 14/58 (24%)
CCP 525..579 CDD:153056 18/64 (28%)
CCP 583..639 CDD:153056 12/58 (21%)
PHA02927 637..897 CDD:222943 84/378 (22%)
CCP 643..697 CDD:153056 16/59 (27%)
CCP 701..757 CDD:153056 18/115 (16%)
Sushi <799..836 CDD:278512 11/36 (31%)
Sushi 841..896 CDD:278512 19/54 (35%)
CCP 901..955 CDD:153056 19/56 (34%)
CCP 959..1015 CDD:153056 19/63 (30%)
Cfhr4NP_001025148.3 CCP 97..146 CDD:153056 13/40 (33%)
CCP 157..209 CDD:153056 13/52 (25%)
PHA02927 208..448 CDD:222943 66/256 (26%)
Sushi 272..325 CDD:278512 11/54 (20%)
CCP 333..388 CDD:153056 15/57 (26%)
CCP 394..448 CDD:153056 17/55 (31%)
Sushi 512..565 CDD:278512 10/52 (19%)
CCP 571..636 CDD:153056 16/66 (24%)
CCP 640..694 CDD:153056 19/55 (35%)
CCP 698..753 CDD:153056 19/56 (34%)
CCP 759..813 CDD:153056 18/61 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.870

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