DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and LAYN

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001245319.1 Gene:LAYN / 143903 HGNCID:29471 Length:382 Species:Homo sapiens


Alignment Length:253 Identity:57/253 - (22%)
Similarity:92/253 - (36%) Gaps:76/253 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 PGTLDEGVVKTFTCA--RPLVGQYVAIQLVGVEGSLSLCEVETFTNDEFSVDRCLSPKIGVDTVV 274
            |||..:.|:......  |...|:.::...:.:.|...:|...|                      
Human     3 PGTALQAVLLAVLLVGLRAATGRLLSASDLDLRGGQPVCRGGT---------------------- 45

  Fly   275 TTFSKTCYD---FHITKGE-SFDKAQAICKQTGGDLVHDFRGATSSYILSELERRKSE-----LK 330
               .:.||.   ||.|... :|::|:..|::.||.||.         |.||.|::..|     |.
Human    46 ---QRPCYKVIYFHDTSRRLNFEEAKEACRRDGGQLVS---------IESEDEQKLIEKFIENLL 98

  Fly   331 PQ--LVWIGAQKEPGITSRT------WKWVNGDVVQKPTWGKDQPNNYNGEQNCVV--------- 378
            |.  ..|||.::.....|.:      :.|.:|.:.|...|..|:|:  .|.:.|||         
Human    99 PSDGDFWIGLRRREEKQSNSTACQDLYAWTDGSISQFRNWYVDEPS--CGSEVCVVMYHQPSAPA 161

  Fly   379 -LDGGRNWLWNDVGCNLDYLHFICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCP 435
             :.|...:.|||..||:.. :|||::|......|..:..          ||:.:.|.|
Human   162 GIGGPYMFQWNDDRCNMKN-NFICKYSDEKPAVPSREAE----------GEETELTTP 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870 9/50 (18%)
CLECT 281..403 CDD:153057 42/148 (28%)
PHA02927 <408..578 CDD:222943 5/28 (18%)
PHA02927 <508..696 CDD:222943
PHA02639 643..>837 CDD:165022
PHA02927 798..1014 CDD:222943
LAYNNP_001245319.1 CLECT_chondrolectin_like 38..186 CDD:153065 44/184 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..285
Interaction with NF2. /evidence=ECO:0000250 330..374
Interaction with TLN1. /evidence=ECO:0000250 337..382
3 X 5 AA repeats of E-S-G-X-V 340..375
2 X 4 AA repeats of N-X-I-Y 356..380
Blue background indicates that the domain is not in the aligned region.

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