DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fw and Cr1l

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_038527.2 Gene:Cr1l / 12946 MGIID:88513 Length:440 Species:Mus musculus


Alignment Length:399 Identity:104/399 - (26%)
Similarity:168/399 - (42%) Gaps:69/399 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   721 VGSEVVFSCSQSHKLSGVLKR----TCLESAVWSDASPKCEEIRCPEPKLAAHSLLSV-TGNDRM 780
            :|:.:::.|     |.|.:||    ||.:.:.|:.|..||...:|..|....:.|:.| ||    
Mouse    64 IGTYLLYEC-----LPGYIKRQFSITCKQDSTWTSAEDKCIRKQCKTPSDPENGLVHVHTG---- 119

  Fly   781 YGRTLIRTSESSQNTAQTYKIGALAKYRCERGYKMVGEALATC--TD-SGQWSGTIPECVYVECG 842
                              .:.|:...|.|.:||:::|.:.|.|  || |..|....|.|.::.|.
Mouse   120 ------------------IQFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPICEWIPCE 166

  Fly   843 APEGINNGKVVLATNATY-YGAAVLYECNVN------FKLNGVSRRLCT----EHGNWSHEAPEC 896
            .|.||.||....:|...: ||..|.|.||.:      |.|.|.....||    |.|.||...|:|
Mouse   167 IPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQC 231

  Fly   897 VEV-VCDTPNINENLIVEAGPRAVGS---VATFKCAKGRIMMGNDTRVCQKNGKWTGKSPTC-RP 956
            :|: .|..|...||.::.:..|::.|   :..|:|..|.||.|..:..||...||..:.|:| :.
Mouse   232 IELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKGASSVHCQSLNKWEPELPSCFKG 296

  Fly   957 VDCGRPLAIEN-GRVIVVNDSTLYGGSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQPRCELATAE 1020
            |.|..|..:.. .:.:.:.....||.:....|...|...|....:|..||:|:....:|...:..
Mouse   297 VICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTLEGSSQSQCQSDGSWNPLLAKCVSRSIS 361

  Fly  1021 GQETSELGTGVGIGATVIVALLVIF-GLIFLYRNKARPVKNTENVQAAET------KDERNAAVM 1078
            |     |..|:.||..|.:.::::| .:|..|:.     :||.:.:..|.      |::....:.
Mouse   362 G-----LIVGIFIGIIVFILVIIVFIWMILKYKK-----RNTTDEKYKEVGIHLNYKEDSCVRLQ 416

  Fly  1079 SYSTLEANN 1087
            |..|.:.|:
Mouse   417 SLLTSQENS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057
CCP 408..462 CDD:153056
CCP 466..520 CDD:153056
CCP 525..579 CDD:153056
CCP 583..639 CDD:153056
PHA02927 637..897 CDD:222943 55/194 (28%)
CCP 643..697 CDD:153056
CCP 701..757 CDD:153056 11/39 (28%)
Sushi <799..836 CDD:278512 13/39 (33%)
Sushi 841..896 CDD:278512 23/65 (35%)
CCP 901..955 CDD:153056 18/57 (32%)
CCP 959..1015 CDD:153056 11/56 (20%)
Cr1lNP_038527.2 PHA02927 42..295 CDD:222943 75/257 (29%)
Sushi 42..98 CDD:278512 10/38 (26%)
CCP 103..161 CDD:153056 19/79 (24%)
CCP 165..232 CDD:153056 23/66 (35%)
CCP 237..293 CDD:214478 17/55 (31%)
CCP <315..356 CDD:153056 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCEG
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102627
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1703
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.800

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