DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fw and Cr2

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001355694.1 Gene:Cr2 / 12902 MGIID:88489 Length:1408 Species:Mus musculus


Alignment Length:1183 Identity:272/1183 - (22%)
Similarity:412/1183 - (34%) Gaps:337/1183 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CGPPAVPLNAKVR---------TITVDSQIAEAHYECDAGYELFGPSAVKC---DRRTGWDRDLP 110
            |..|..||:..|.         |||         |.|:.||.|.|.|:..|   |....||.|:|
Mouse    83 CMNPQEPLHGSVHINTGIEFGSTIT---------YSCNQGYRLIGDSSATCIVSDNTVMWDNDMP 138

  Fly   111 FCGVNVAYRKP--VNQSSYTRSGPAS---------YANDGKPGNKNPD--GQE---CSETQKEPS 159
            .| .::....|  ::...:..|...|         |.:.||...|..|  |::   |:....:..
Mouse   139 LC-ESIPCESPPAISNGDFYSSSRDSFFYGMVVTYYCHTGKNREKLFDLVGEKSIYCTSKDNQVG 202

  Fly   160 PWWRVDLLTPQAVHVVRITTRGCCGHQPLQDLE--------------------------IRVGNS 198
            .|   :...||.:..|:      |   |:.::|                          ...|:.
Mouse   203 IW---NSPPPQCIPRVK------C---PMPEIENGLVESGFKHSFFLNDTVIFKCKSGFTMKGSR 255

  Fly   199 SADLQRN-----PLCAWYPGTL-------------DEGVVKTFTCARPLVGQYVAIQ------LV 239
            .|..|.|     ||...:.|.|             ||    .|:     |||.|:..      |:
Mouse   256 IAWCQPNSKWSPPLPTCFMGCLPPQNILHGDYNKKDE----FFS-----VGQKVSYSCNPGYTLI 311

  Fly   240 GVEGSLSLCEVETFTNDEFSVDRCLSPKIGVDTVVTTFSKTC--YDFHITKGESF--------DK 294
            |             ||    :..|.|.....:||.|...|:|  ...|:..|..|        .:
Mouse   312 G-------------TN----LVECTSLGTWSNTVPTCEVKSCDAIPNHLLHGRVFLPPNLQLGAE 359

  Fly   295 AQAICKQTGGDLVHDFRGATSSYILSELERRKSELKPQLVW---------IGAQKEPGITSRTWK 350
            ...:|     ||....:|..||..:.|.|        .::|         |.....|.:.:....
Mouse   360 VSFVC-----DLGFQLKGKPSSQCIPEGE--------TVIWNNKFPVCEQISCDPPPEVKNARKP 411

  Fly   351 W-----VNGDVVQ-----------------------KPTWGKDQP--NNYNGEQNC--VVLDGG- 382
            :     |.|.|::                       ..||.|..|  .:.|...:|  .::.|| 
Mouse   412 YYSLPIVPGTVLRYTCSPSYRLIGEKAIFCISENQVHATWDKAPPICESVNKTISCSDPIVPGGF 476

  Fly   383 ----------------------------------RNWLWNDVG---CNLDYLHFICQHSPLSCGS 410
                                              .|.:|....   |..|:        ||.|.|
Mouse   477 MNKGSKAPFRHGDSVTFTCKANFTMKGSKTVWCQANEMWGPTALPVCESDF--------PLECPS 533

  Fly   411 PDAQQNTTVMGK---KFTLGEKIQYTCPKGHSLLGQTERECRLDGTWSGSSPTCKYVDC---GSL 469
            .....|....|:   :|..|..:.|:|..|:.|.|:...:|...|.|.|..||||...|   |..
Mouse   534 LPTIHNGHHTGQHVDQFVAGLSVTYSCEPGYLLTGKKTIKCLSSGDWDGVIPTCKEAQCEHPGKF 598

  Fly   470 PELKFGSIHMSEERTSF--GVVATYSCHENYTLIGNENRTCAMDG----WSGKQPECLVDWCPDP 528
            |.   |.:   :|..|.  |....:||:|.|.|.|..:..|.:..    |: |:|.|....||.|
Mouse   599 PN---GQV---KEPLSLQVGTTVYFSCNEGYQLQGQPSSQCVIVEQKAIWT-KKPVCKEILCPPP 656

  Fly   529 QPIAGGD--VRFNDK-RAGSTATYVCEP------GYVLVGEAIISCGLG----GEWSSKTPSC-- 578
            .|:..|.  ..|::. ..|||.||.|:|      .:.|:||..|:|..|    |.||...|.|  
Mouse   657 PPVRNGSHTGSFSENVPYGSTVTYTCDPSPEKGVSFTLIGEKTINCTTGSQKTGIWSGPAPYCVL 721

  Fly   579 --RFVDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVCELV 641
              ..|.|..|......|..:|..:.:.|..|.:.|:....|.|...:.|...|.|....||||..
Mouse   722 STSAVLCLQPKIKRGQILSILKDSYSYNDTVAFSCEPGFTLKGNRSIRCNAHGTWEPPVPVCEKG 786

  Fly   642 TCETPSVPSG----SFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAPYCEYIDCG 702
            ....|.:.:|    |:::.:|..  :.|:|:||||:::.|...:.|...|:|:...|.|...:|.
Mouse   787 CQAPPKIINGQKEDSYLLNFDPG--TSIRYSCDPGYLLVGEDTIHCTPEGKWTPITPQCTVAECK 849

  Fly   703 TILPIPYGSHKYV-TNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPKCEEIRCPEPKL 766
                 |.|.|.:. ....::.:.|..||.:..:||....:.|..:..|......|:||.||.|  
Mouse   850 -----PVGPHLFKRPQNQFIRTAVNSSCDEGFQLSESAYQLCQGTIPWFIEIRLCKEITCPPP-- 907

  Fly   767 AAHSLLSVTGNDRMYGRTLIRTSESSQNTAQTYKIGALAKYRCERG------YKMVGEALATCT- 824
                             .:|.....:.::::....|.:..|.|..|      :|::||....|| 
Mouse   908 -----------------PVIHNGTHTWSSSEDVPYGTVVTYMCYPGPEEGVKFKLIGEQTIHCTS 955

  Fly   825 DS---GQWSGTIPECVY----VECGAPEGINNGKVVLATNATY-YGAAVLYECNVNFKLNGVSRR 881
            ||   |.||...|.|..    |:| ....:.||..:....|.| |..:|:::|:..:.|:|.|:.
Mouse   956 DSRGRGSWSSPAPLCKLSLPAVQC-TDVHVENGVKLTDNKAPYFYNDSVMFKCDDGYILSGSSQI 1019

  Fly   882 LCTEHGNWSHEAPECVEVVCDTPNIN---ENLIVEAGPRAVGSVATFKCAKGRIMMGNDTRVCQ- 942
            .|..:..|..|.|.|.:..|:...::   ::..::...|.        |..|..:.|.....|| 
Mouse  1020 RCKANNTWDPEKPLCKKEGCEPMRVHGLPDDSHIKLVKRT--------CQNGYQLTGYTYEKCQN 1076

  Fly   943 -KNGKWTGKSPTCRPVDCGRPLAIEN-GRVIVVNDSTLYGGSAEYHCIPNYNRIGQYLRKCTED- 1004
             :||.|..|...|..:.|..|..|.| |...::....|||....|.|...:..:|:...:|..| 
Mouse  1077 AENGTWFKKIEVCTVILCQPPPKIANGGHTGMMAKHFLYGNEVSYECDEGFYLLGEKSLQCVNDS 1141

  Fly  1005 ---GAWSGKQPRC 1014
               |:|||..|:|
Mouse  1142 KGHGSWSGPPPQC 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056 21/65 (32%)
FTP 113..261 CDD:128870 36/213 (17%)
CLECT 281..403 CDD:153057 30/210 (14%)
CCP 408..462 CDD:153056 17/56 (30%)
CCP 466..520 CDD:153056 17/62 (27%)
CCP 525..579 CDD:153056 24/70 (34%)
CCP 583..639 CDD:153056 14/55 (25%)
PHA02927 637..897 CDD:222943 69/279 (25%)
CCP 643..697 CDD:153056 15/57 (26%)
CCP 701..757 CDD:153056 11/56 (20%)
Sushi <799..836 CDD:278512 15/46 (33%)
Sushi 841..896 CDD:278512 15/55 (27%)
CCP 901..955 CDD:153056 11/58 (19%)
CCP 959..1015 CDD:153056 19/61 (31%)
Cr2NP_001355694.1 PHA02927 10..272 CDD:222943 45/210 (21%)
PHA02927 291..523 CDD:222943 45/270 (17%)
PHA02927 548..783 CDD:222943 71/241 (29%)
PHA02927 719..1034 CDD:222943 84/341 (25%)
PHA02927 991..1220 CDD:222943 44/172 (26%)
PHA02927 <1153..1343 CDD:222943 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCEG
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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