DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and CSMD2

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001268885.1 Gene:CSMD2 / 114784 HGNCID:19290 Length:3631 Species:Homo sapiens


Alignment Length:1305 Identity:293/1305 - (22%)
Similarity:434/1305 - (33%) Gaps:446/1305 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QICGPPAVPLNAKVR--TITVDSQIAEAHYECDAGYELFGPSAVKCDRRT--GWDRDLPF----C 112
            |.|..|....|..||  ...|...:.   :||..||:|.|...:.|...|  .||..||.    |
Human  2119 QECPDPEPFANGIVRGAGYNVGQSVT---FECLPGYQLTGHPVLTCQHGTNRNWDHPLPKCEVPC 2180

  Fly   113 GVNVAYRKPVNQSSYTRSGPASYANDGKPGNKNPDGQEC----------------SETQKEPSPW 161
            |.|:.   ..|.:.|:...|:.|::          .|:|                |..|.|||. 
Human  2181 GGNIT---SSNGTVYSPGFPSPYSS----------SQDCVWLITVPIGHGVRLNLSLLQTEPSG- 2231

  Fly   162 WRVDLLT-----PQAVHVVRITTRGCCGHQPLQDLEIRV-----------GNSSADLQRNPLCAW 210
               |.:|     .|....:.:.||. ...:.:|....:|           |..:......||...
Human  2232 ---DFITIWDGPQQTAPRLGVFTRS-MAKKTVQSSSNQVLLKFHRDAATGGIFAIAFSAYPLTKC 2292

  Fly   211 YPGTL-------------DEGVVKTFTC--ARPLVGQYVAIQLVGV----EGSLSLCEVETFTND 256
            .|.|:             :.|.:..:.|  ...|||..:....:|.    ||...:|||...||:
Human  2293 PPPTILPNAEVVTENEEFNIGDIVRYRCLPGFTLVGNEILTCKLGTYLQFEGPPPICEVHCPTNE 2357

  Fly   257 EFSVDRCLSPKIGVDTVVTTFS--------KTCY-------DFHITKGESFDKAQAICKQTGGDL 306
                  .|:...|   |:.:.|        :||.       |::|:                   
Human  2358 ------LLTDSTG---VILSQSYPGSYPQFQTCSWLVRVEPDYNIS------------------- 2394

  Fly   307 VHDFRGATSSYILSELERRKSELKPQLVWIGAQKEPGITSRTWKWVNGDVVQKPTWGKDQPNNYN 371
                  .|..|.|||.:..:.|:                      .:|...|.|.. |....||:
Human  2395 ------LTVEYFLSEKQYDEFEI----------------------FDGPSGQSPLL-KALSGNYS 2430

  Fly   372 ------GEQNCVVLDGGRNWLWNDVGCNLDY---------------------------LHF---- 399
                  ...|.|.|....:..:|..|..:.|                           :||    
Human  2431 APLIVTSSSNSVYLRWSSDHAYNRKGFKIRYSAPYCSLPRAPLHGFILGQTSTQPGGSIHFGCNA 2495

  Fly   400 ----------ICQHSP---------------LSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHS 439
                      ||...|               ||||.|:|.:|..|.||::|:|.|..|:|.:|:.
Human  2496 GYRLVGHSMAICTRHPQGYHLWSEAIPLCQALSCGLPEAPKNGMVFGKEYTVGTKAMYSCSEGYH 2560

  Fly   440 L---------------------------------------------------------------- 440
            |                                                                
Human  2561 LQAGAEATAECLDTGLWSNRNVPPQCVPVTCPDVSSISVEHGRWRLIFETQYQFQAQLMLICDPG 2625

  Fly   441 ---LGQTERECRLDGTWS--GSSPTCKYVDCGSLPELKFGSIHMSEERTSFGVVATYSCHENYTL 500
               .||....|:.:|.||  .|:|||:.:.||.||....|  |.....:.:|..|.:||:..|||
Human  2626 YYYTGQRVIRCQANGKWSLGDSTPTCRIISCGELPIPPNG--HRIGTLSVYGATAIFSCNSGYTL 2688

  Fly   501 IGNENRTCAMDG-WSGKQPECL-------------------------VDWCPDPQPIAGGDVRFN 539
            :|:..|.|..:| |||.:..||                         ...|..|:||..|.:...
Human  2689 VGSRVRECMANGLWSGSEVRCLATQTKLHSIFYKLLFDVLSSPSLTKAGHCGTPEPIVNGHINGE 2753

  Fly   540 DKRAGSTATYVCEPGYVLVGEAIISCGLGGEWSSKTPSCRFVDCGAPARPNRGIAILLNGTT--- 601
            :.....:..|.|..|:.|:|.::..|.....||.|||.|..:.||.|..|       :||.|   
Human  2754 NYSYRGSVVYQCNAGFRLIGMSVRICQQDHHWSGKTPFCVPITCGHPGNP-------VNGLTQGN 2811

  Fly   602 --TVNSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVCELVTCETPSVPSGSFVIGYDYN---- 660
              .:|.|||:.|:..:..:|.:...|...|:||...|.|.::.|..|         |:..|    
Human  2812 QFNLNDVVKFVCNPGYMAEGAARSQCLASGQWSDMLPTCRIINCTDP---------GHQENSVRQ 2867

  Fly   661 VHSK----------IQYNCDPGHIMHGTPVLECLDSGEWSADAPYCEYIDCGTILPIPYGSHKYV 715
            ||:.          :.|.|:.|..:.|||||.|...|.|....|.|..:.||.....|   |..:
Human  2868 VHASGPHRFSFGTTVSYRCNHGFYLLGTPVLSCQGDGTWDRPRPQCLLVSCGHPGSPP---HSQM 2929

  Fly   716 TNTTY-VGSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPKCEEIR---CPEPKLAAHSLLSVTG 776
            :..:| ||:.|.:||.....|.|...|.|.....|:.:.|.|....   |.:|.:.||.      
Human  2930 SGDSYTVGAVVRYSCIGKRTLVGNSTRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHG------ 2988

  Fly   777 NDRMYGRTLIRTSESSQNTAQTYKIGALAKYRCERGYKMVGEALATCTDSGQWSGTIPECVYVEC 841
                     ||..:|       :..|.:.::.||.|:.:.|.:..||..:|.|||:.|||..:.|
Human  2989 ---------IRLGDS-------FDPGTVMRFSCEAGHVLRGSSERTCQANGSWSGSQPECGVISC 3037

  Fly   842 GAPEGINNGKVVLATNATYYGAAVLYECNVNFKLNGVSRRLCTEHGNWSHEAPECVEVVCDTPNI 906
            |.|...:|.:||. ::...:.::::|||...:...|:..|.|:.:|.|:...|||:.:.|..|.|
Human  3038 GNPGTPSNARVVF-SDGLVFSSSIVYECREGYYATGLLSRHCSVNGTWTGSDPECLVINCGDPGI 3101

  Fly   907 NENLIVEAGPRAVGSVATFKCAKGRIMMGNDTRV--CQKNGKWTGKSPTCRPVDCGRPLAIENGR 969
            ..|.:............|::|..|.:|..:...|  |.|:..|.|..|.|:.:.|..|..|.||:
Human  3102 PANGLRLGNDFRYNKTVTYQCVPGYMMESHRVSVLSCTKDRTWNGTKPVCKALMCKPPPLIPNGK 3166

  Fly   970 VIVVNDSTLYGGSAEYHCIPNYN------------------------------------------ 992
              ||....::|.|..|.|:..|.                                          
Human  3167 --VVGSDFMWGSSVTYACLEGYQLSLPAVFTCEGNGSWTGELPQCFPVFCGDPGVPSRGRREDRG 3229

  Fly   993 ----------------RIGQYLRKCTEDGAWSGKQPRC---ELATAEGQETSELG-----TGVGI 1033
                            .:|...|.|..||.|||.||.|   .|.|.......:.|     .|..:
Human  3230 FSYRSSVSFSCHPPLVLVGSPRRFCQSDGTWSGTQPSCIDPTLTTCADPGVPQFGIQNNSQGYQV 3294

  Fly  1034 GATVI 1038
            |:||:
Human  3295 GSTVL 3299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056 18/61 (30%)
FTP 113..261 CDD:128870 38/198 (19%)
CLECT 281..403 CDD:153057 25/175 (14%)
PHA02927 <408..578 CDD:222943 63/264 (24%)
PHA02927 <508..696 CDD:222943 61/232 (26%)
PHA02639 643..>837 CDD:165022 56/211 (27%)
PHA02927 798..1014 CDD:222943 68/275 (25%)
CSMD2NP_001268885.1 CUB 66..173 CDD:238001
CCP 179..236 CDD:214478
CUB 242..345 CDD:238001
CCP 383..441 CDD:153056
CUB 445..553 CDD:395345
CCP 561..615 CDD:153056
CUB 618..725 CDD:238001
CCP 731..789 CDD:153056
CUB 792..899 CDD:238001
CCP 907..961 CDD:153056
CUB 964..1072 CDD:238001
CCP 1079..1135 CDD:153056
CUB 1138..1245 CDD:238001
CCP 1251..1308 CDD:153056
CUB 1311..1419 CDD:238001
CCP 1425..1482 CDD:153056
CUB 1485..1590 CDD:395345
CCP 1598..1655 CDD:153056
CUB 1659..1766 CDD:238001
CCP 1775..1833 CDD:153056
CUB 1836..1941 CDD:238001
CCP 1949..2005 CDD:153056
CUB 2008..2115 CDD:238001
Sushi 2121..2176 CDD:459664 18/57 (32%)
CUB 2180..2286 CDD:238001 22/123 (18%)
Sushi 2292..2349 CDD:459664 10/56 (18%)
CUB 2357..2463 CDD:238001 26/162 (16%)
PHA02927 <2486..2642 CDD:222943 26/155 (17%)
PHA02927 2609..2850 CDD:222943 67/249 (27%)
PHA02927 2792..3032 CDD:222943 75/280 (27%)
Sushi 3037..3091 CDD:459664 15/54 (28%)
PHA02927 3091..3330 CDD:222943 46/211 (22%)
CCP 3334..3389 CDD:153056
Blue background indicates that the domain is not in the aligned region.

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