DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and CFHR3

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_066303.2 Gene:CFHR3 / 10878 HGNCID:16980 Length:330 Species:Homo sapiens


Alignment Length:334 Identity:85/334 - (25%)
Similarity:136/334 - (40%) Gaps:54/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 YVDCGS-------LPELKFGSI-HMSEERTSFGVVA----TYSCHENY-TLIGN--ENRTCAMDG 512
            :|.|.:       .|::|.|.: |.:..|..|.|..    :|.|.|:: |..|:  :...|..:|
Human    12 WVSCANGQVKPCDFPDIKHGGLFHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDYIHCTQNG 76

  Fly   513 WSGKQPECLVDWCPDPQPIAGGDVRFNDKRA-GSTATYVCEPGYVL-VGEAIISCGLGGEWSSKT 575
            ||...| ||.. |..|....|.:..:..|.. |::....|.|||.| ..:..::|...| | |.|
Human    77 WSPAVP-CLRK-CYFPYLENGYNQNYGRKFVQGNSTEVACHPGYGLPKAQTTVTCTEKG-W-SPT 137

  Fly   576 PSC-RFVDCG-APARPNRGIAILLNGTTTVNSVVKYECDEDH-WLDGQS--ELYCTREGKWSGEA 635
            |.| |...|. :......|.....:....:|..::|:|...: ..||.|  .:.|.:.| ||.: 
Human   138 PRCIRVRTCSKSDIEIENGFISESSSIYILNKEIQYKCKPGYATADGNSSGSITCLQNG-WSAQ- 200

  Fly   636 PVC--ELVTC-ETPSVPSG---SFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAP 694
            |:|  ....| ..|.:.:|   ||::.. |...|:::|.|.|.:.:.|:..:.| .:|||| :.|
Human   201 PICINSSEKCGPPPPISNGDTTSFLLKV-YVPQSRVEYQCQPYYELQGSNYVTC-SNGEWS-EPP 262

  Fly   695 YC--------EYIDCGTILPIPYGSHKYVTNTTYVGSEVVFSCSQSHKLSGVL---KRTCLESAV 748
            .|        |.::...|........||...|   |..:.|.|...:..:..:   :..|.|..|
Human   263 RCIHPCIITEENMNKNNIKLKGRSDRKYYAKT---GDTIEFMCKLGYNANTSILSFQAVCREGIV 324

  Fly   749 WSDASPKCE 757
               ..|:||
Human   325 ---EYPRCE 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057
CCP 408..462 CDD:153056
CCP 466..520 CDD:153056 18/68 (26%)
CCP 525..579 CDD:153056 17/56 (30%)
CCP 583..639 CDD:153056 14/61 (23%)
PHA02927 637..897 CDD:222943 33/138 (24%)
CCP 643..697 CDD:153056 18/65 (28%)
CCP 701..757 CDD:153056 11/58 (19%)
Sushi <799..836 CDD:278512
Sushi 841..896 CDD:278512
CCP 901..955 CDD:153056
CCP 959..1015 CDD:153056
CFHR3NP_066303.2 CCP <13..>142 CDD:332582 38/132 (29%)
CCP 107..329 CDD:332582 58/234 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
10.960

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