DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and reg1a

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_031755201.1 Gene:reg1a / 101731464 XenbaseID:XB-GENE-29085383 Length:296 Species:Xenopus tropicalis


Alignment Length:135 Identity:40/135 - (29%)
Similarity:63/135 - (46%) Gaps:28/135 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 FSKTCYDFHITKGESFDKAQAICKQTGGDLVHDFRGATSSYILSELERRKSELKP----QLVWIG 337
            |..:|| :.:|..:::..||||||....|||           :...:|:|:.::.    ...|||
 Frog   179 FDGSCY-YIVTTQKNWVDAQAICKSKNSDLV-----------IVNSDRKKNFIESITDNSYFWIG 231

  Fly   338 AQKEPGITSRTWKWVNGDVVQKPT--WGKDQPNNYNGEQNCVVLDGGRNW---LWNDVGCNLDYL 397
            .::: ......|:||:|.....|.  |.|.:|||..|:::||.:     |   .||||.|. |..
 Frog   232 LKRD-NKDKDEWRWVDGTYYNPPERFWMKGEPNNGGGKEDCVHM-----WKEKKWNDVYCT-DQF 289

  Fly   398 HFICQ 402
            ..||:
 Frog   290 KAICE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057 39/131 (30%)
PHA02927 <408..578 CDD:222943
PHA02927 <508..696 CDD:222943
PHA02639 643..>837 CDD:165022
PHA02927 798..1014 CDD:222943
reg1aXP_031755201.1 auto_Ata <86..>161 CDD:411124
CLECT_DC-SIGN_like 172..295 CDD:153060 40/135 (30%)
Blue background indicates that the domain is not in the aligned region.

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