DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and clec4d

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_017948241.1 Gene:clec4d / 101731344 XenbaseID:XB-GENE-29085291 Length:175 Species:Xenopus tropicalis


Alignment Length:131 Identity:40/131 - (30%)
Similarity:63/131 - (48%) Gaps:21/131 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 FSKTCYDFHITKGESFDKAQAICKQTGGDLVHDFRGATSSYILSELERR--KSELKPQLVWIGAQ 339
            |...|| :.:|..:::..|:|.||....|||         .|.||.|:.  .|.......|||.:
 Frog    59 FDGNCY-YIVTTKKAWTDARAACKLKNSDLV---------IINSEREQNFLSSITDMSDFWIGLK 113

  Fly   340 KEPGITSRT-WKWVNGDV--VQKPTWGKDQPNNYNGEQNCVVLDGGRNWLWNDVGCNLDYLHFIC 401
               |.|.:. |:||:|.:  :.:..|.|.:|||..|:::||.:...:.  |||:.|:..| ..||
 Frog   114 ---GNTDKNEWRWVDGTIHKLSEGFWLKGEPNNSGGQEDCVHMRVQKK--WNDIVCSNQY-KAIC 172

  Fly   402 Q 402
            :
 Frog   173 E 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057 39/127 (31%)
PHA02927 <408..578 CDD:222943
PHA02927 <508..696 CDD:222943
PHA02639 643..>837 CDD:165022
PHA02927 798..1014 CDD:222943
clec4dXP_017948241.1 CLECT_DC-SIGN_like 52..174 CDD:153060 40/131 (31%)
Blue background indicates that the domain is not in the aligned region.

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