DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fw and selp

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_031756924.1 Gene:selp / 100485005 XenbaseID:XB-GENE-482807 Length:976 Species:Xenopus tropicalis


Alignment Length:989 Identity:238/989 - (24%)
Similarity:362/989 - (36%) Gaps:236/989 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 SFDKAQAICKQTGGDLVHDFRGATSSYILSELERRKSELKPQLVWIGAQKEPGITSRTWKWVNGD 355
            :::.|:..|:.....||.......:.|:.|.|     ...|...|||.:    :....|.|....
 Frog    30 TYEDARKFCQTRYTALVAIQNREENDYLNSIL-----PFNPAYYWIGIR----LIENQWTWEGTK 85

  Fly   356 VV---QKPTWGKDQPNNYNGEQNCVVL------DGGRNWLWNDVGCN-----LDYL--------- 397
            .|   :...|..::|||....::||.:      |||:   |||..|.     |.|.         
 Frog    86 KVLTEEAKNWALNEPNNKKSNEDCVEMYVKREKDGGK---WNDEPCRKKKVALCYTAACSPSSCS 147

  Fly   398 ----------HFICQ-----------------------HSPLSCG--SPDAQQNTTV-------- 419
                      ::.|.                       |..::|.  |.:...|::.        
 Frog   148 GHGECIETINNYTCSCYEGFYGSACE
HVLDCKMPSVPTHGHMNCNGLSGEVMYNSSCEFSCDEGF 212

  Fly   420 ---------------------------------MGK--------KFTLGEKIQYTCPKGHSLLGQ 443
                                             :|.        ||.......::|.:|.:|.|.
 Frog   213 ALTGNKVIQCKEEWSGLVPQCAVVDCPRLVVPELGSMECKDEYGKFQYNSNCSFSCNEGFTLTGP 277

  Fly   444 TERECRLDGTWSGSSPTCKYVDCGSLPELKFGSIHMSE--ERTSFGVVATYSCHENYTLIGNENR 506
            ...:|...|:||...|.||.|.|.|:|..:.||:...:  |...:....::||:|.:||.|:.:.
 Frog   278 NSLQCTSSGSWSSDVPACKAVVCPSIPVPEHGSMKCEDDYEEFQYNSNCSFSCNEGFTLAGSNSL 342

  Fly   507 TCAMDG-WSGKQPECLVDWCPDPQPIA------------GGDVRFNDKRAGSTATYVCEPGYVLV 558
            .|...| ||...|.|....||   ||.            .|:.::|     |..::.|..|::|.
 Frog   343 QCTSSGSWSSNVPTCEAVVCP---PITCPEHGSKECEDDFGEFQYN-----SNCSFSCSEGFILT 399

  Fly   559 GEAIISCGLGGEWSSKTPSCRFVDCGAPARPNRGIAILL--NGTTTVNSVVKYECDEDHWLDGQS 621
            |...:.|...|.|||..|:|:.|||.....|..|.....  :|....||...:.|.|...|...:
 Frog   400 GSNSLQCTSSGSWSSDVPAC
KAVDCPHLVVPELGSMECKDEHGEFKYNSNCSFSCKEGFTLTESN 464

  Fly   622 ELYCTREGKWSGEAPVCELVTCETPSVP---SGSFVIGYDY---NVHSKIQYNCDPGHIMHGTPV 680
            .|.||..|.||.:.|.|:.|.|  ||:|   .||.....||   ..:||..::|:.|.|:.|:..
 Frog   465 SLQCTSSGSWSSDVPACKAVVC--PSIPVPEHGSMKCEDDYEEFQYNSKCSFSCNEGFILAGSNS 527

  Fly   681 LECLDSGEWSADAPYCEYIDCGTILPIP----------YGSHKYVTNTTYVGSEVVFSCSQSHKL 735
            |:|..||.||:|.|.|:.:.|.:| |:|          ||..:|.:|.:       ||||:...|
 Frog   528 LQCTSSGSWSSDVPTCKAVVCPSI-PLPEHGSKECENDYGEFQYNSNCS-------FSCSEGFTL 584

  Fly   736 SGVLKRTCLESAVWSDASPKCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSES--------- 791
            :|.....|..|..||...|.|:.:.||.  |....|.|:...|. |||....::.|         
 Frog   585 TGPNSLQCTSSGSWSSDVPACKAVDCPH--LVVPELGSMECKDE-YGRFQYNSNCSFSCKEGFTL 646

  Fly   792 -SQNTAQTYKIGA-----------------------------LAKYR--------CERGYKMVGE 818
             ..|:.|....|:                             ..|::        |..|:.:.|.
 Frog   647 TGSNSLQCISSGSWGSDVPTCEAVACPDIPVPEHGFIKCEDDYGKFQYNSNCSVSCNEGFFLTGS 711

  Fly   819 ALATCTDSGQWSGTIPECVYVECGAPEGINNGKVVLATNATYYGAAVLYECNVNFKLNGVSRRLC 883
            ....||.||.||..:|.|..|:|...:...||. |.....:.|.:...|.|...:.|.|:|...|
 Frog   712 DSLKCTSSGSWSSDVPACEAVQCETLKDPENGH-VKCPEKSEYNSTCSYTCAEGYNLVGLSEVQC 775

  Fly   884 TEHGNWSHEAPECVEVVCDTPNINENLIVEAGPRA-VGSVATFKCAKGRIMMGNDTRVCQKNGKW 947
            ...|:|....|.|..|.|.:.|..||..|:...:. ..|..|:.||:|..:.|:....|..:|:|
 Frog   776 LASGDWMSPPPICEVVQCASLNNPENGWVKCQEKPYYKSKCTYGCAEGYTLSGSSEHQCLSSGEW 840

  Fly   948 TGKSPTCRPVDCGRPLAIENGRVIVVNDS-----TLYGGSAEYHCIPNYNRIGQYLRKCTEDGAW 1007
            |..:|||..|:|..|...:.|:   :|.|     ..||...::.|..:....|....:|...|.|
 Frog   841 TSSAPTCEVVECKVPFIPDMGK---MNCSHPFGDFKYGSVCKFECEGDRLLNGTNTLECESTGTW 902

  Fly  1008 SGKQPRCELATAEGQETSELGTGVGIGATVIVALLVIFGLIFLYRNKARPVKNTENVQAAETKDE 1072
            |.:.|.||....  .::..:...||:.||....|.|...:|:|.:...:..|......:.:..:|
 Frog   903 SSEVPTCEAPRV--PDSGVVNVAVGVAATGASLLSVTSLMIWLVKRLRKSAKKFTPSSSCQKLEE 965

  Fly  1073 RNAAVMSYSTLEAN 1086
            ...    |..:|.|
 Frog   966 AGV----YQNIEDN 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057 30/167 (18%)
CCP 408..462 CDD:153056 15/104 (14%)
CCP 466..520 CDD:153056 17/56 (30%)
CCP 525..579 CDD:153056 17/65 (26%)
CCP 583..639 CDD:153056 16/57 (28%)
PHA02927 637..897 CDD:222943 85/322 (26%)
CCP 643..697 CDD:153056 22/59 (37%)
CCP 701..757 CDD:153056 19/65 (29%)
Sushi <799..836 CDD:278512 12/73 (16%)
Sushi 841..896 CDD:278512 14/54 (26%)
CCP 901..955 CDD:153056 17/54 (31%)
CCP 959..1015 CDD:153056 14/60 (23%)
selpXP_031756924.1 CLECT_selectins_like 20..138 CDD:153062 28/119 (24%)
EGF_CA 142..173 CDD:238011 1/30 (3%)
PHA02927 178..419 CDD:222943 54/248 (22%)
PHA02927 439..667 CDD:222943 71/240 (30%)
CCP 672..730 CDD:153056 11/57 (19%)
PHA02927 <710..909 CDD:222943 59/202 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 308 1.000 Inparanoid score I2582
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002067
OrthoInspector 1 1.000 - - otm48879
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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