DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and HGTX

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:375 Identity:85/375 - (22%)
Similarity:130/375 - (34%) Gaps:112/375 - (29%)


- Green bases have known domain annotations that are detailed below.


Human     7 SPGSLPENAQVSRHS-RRREPRSTGRQFCGFNAARRSDYKTQQIINPAE---QQRPRAPPLPMSS 67
            ||.:.|..|....|| ....||.......|.::|:  .|...|..:.||   |....|.|.|...
  Fly   178 SPSTTPPPASSRLHSDSSPSPRYEHNSSPGVDSAK--SYALSQRSSGAEDPCQTSESASPPPQGQ 240

Human    68 YFVNSTFPVTLASGQESF-----LGQLPLYSSGYAD---------------PLRHYPAPY----- 107
               |...|..|:|.:..|     :..|.|:::.:|.               ||.....|.     
  Fly   241 ---NDYSPENLSSQRAKFQHHHGVNPLALHNANHAGNPGCHNNNNHMDHKLPLSFLGPPLAALHS 302

Human   108 ------GPGPGQDKGFATSSYYP-----------PAGGG-----------YGRAAPCDYG----- 139
                  |.|.|.....|....|.           .:||.           ..:.||..:|     
  Fly   303 MTTEMKGQGVGGSSASANGLSYSHSPNSHLISDRGSGGSSSSSSTTTTNTNSQGAPNPHGIDTIL 367

Human   140 --PAPAFYREKESACALSGADEQPPFHPEPRKSDCAQD---------KSVFGETEEQKCSTPVY- 192
              |.|.   ......||:||. .|.|......:..||.         |:..|...::   |.:| 
  Fly   368 SKPPPV---TSAGLSALTGAG-IPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDR---THLYW 425

Human   193 -----------PWMQRMNSCNSSSFG------PSG------RRGRQTYTRYQTLELEKEFHYNRY 234
                       .|.:|:::..|::..      ||.      :..|.|::..|...|||.|...:|
  Fly   426 PGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKY 490

Human   235 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEE 284
            |....|.::|:||.::|.|:|:||||||.||:|..   :|...:|:.:::
  Fly   491 LAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRH---AAEMATAKRKQD 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 24/55 (44%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 44/217 (20%)
Homeodomain 465..523 CDD:459649 24/57 (42%)

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