DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and Abd-B

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:331 Identity:93/331 - (28%)
Similarity:134/331 - (40%) Gaps:92/331 - (27%)


- Green bases have known domain annotations that are detailed below.


Human     3 ETPPSPGSLPENAQVSRHSRRREPRSTGRQFCGFNAARRSDYKTQQIINPAEQQRPRAPPLPMSS 67
            :||..|.:..:....|.|.::...:.|..     :.|..:....||     :||:..|...|..:
  Fly   146 QTPTGPSAQQQQHLTSPHHQQLPQQQTPN-----SVASGASSNLQQ-----QQQQQNAAVAPGQT 200

Human    68 YFV----NSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPG---------------- 112
            ..|    .|..|.:::|.:|.....:.|      .|| |.|| ...|||                
  Fly   201 QIVAPTTASVSPSSVSSQKEDINMSIQL------APL-HIPA-IRAGPGFETDTSAAVKRHTAHW 257

Human   113 --QDKGFATSSYYPPAGGGYGR----AAPCD---------YGPAPAFYREKESACALSGADEQPP 162
              .|:||  :.:|  ..|.|.|    |.|..         :||.   ||..::..|.:.|   ..
  Fly   258 AYNDEGF--NQHY--GSGYYDRKHMFAYPYPETQFPVGQYWGPN---YRPDQTTSAAAAA---AY 312

Human   163 FHPEPRKSDCAQDKSVFGETEEQKCSTPVYP---WMQRMNSCNSSSFGPSG-------------- 210
            .:...|....|..:||.| |.......|.|.   .::...|.|.||.|.||              
  Fly   313 MNEAERHVSAAARQSVEG-TSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNP 376

Human   211 -----------RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 264
                       |:.|:.|:::|||||||||.:|.|:::::|.|:|..|.|||||:||||||||||
  Fly   377 GLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMK 441

Human   265 WKKESK 270
            .||.|:
  Fly   442 NKKNSQ 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 33/55 (60%)
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 33/55 (60%)

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