DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and E5

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:305 Identity:73/305 - (23%)
Similarity:99/305 - (32%) Gaps:108/305 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    12 PENAQVSRHSRRREPRSTGRQFCGFNAARRSDYKTQQIINPAEQQRPRAPPLPMSSYFVNSTFPV 76
            |:.:.|||..  ..|.:.|......|.|:..| .:....||....||...|.|..:...|.|.|.
  Fly   115 PQRSPVSRSP--SPPNAGGNPAAAGNTAKSGD-PSSGTGNPPTLIRPLPLPAPNLALIGNRTSPN 176

Human    77 TLA----------SGQESFLG----------------------QLPLYSSGYA-DPLRHYPA--- 105
            .:|          |....||.                      |||...:|.. .|..|.|.   
  Fly   177 AMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQI 241

Human   106 -----PYGPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHP 165
                 |.||.||          :||..|.:      .:|.||...|:                  
  Fly   242 PLGIFPGGPHPG----------HPPPHGHH------PFGSAPHLIRD------------------ 272

Human   166 EPRKSDCAQDKSVFGETEEQKCSTPVYPWMQRMNS------CNSSSFGP--SGRRGRQTYTRYQT 222
                                  |.|:|||:...:.      ..:..|.|  ..:|.|..::..|.
  Fly   273 ----------------------SYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQL 315

Human   223 LELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 267
            |:||..|..|.|:....|.::|..|.|||.|:|:||||||.|.|:
  Fly   316 LKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 24/55 (44%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 24/55 (44%)

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