DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and slou

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster


Alignment Length:276 Identity:69/276 - (25%)
Similarity:101/276 - (36%) Gaps:77/276 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    28 STGRQFCGFNAARRSDYKTQQII-------NPAEQQRPRAPPLPM-----SSYFVN-STFPVTLA 79
            :|.||......| |||...:..:       |......|...|:.:     ||...| |:...:.:
  Fly   372 ATSRQIAAATYA-RSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTSAS 435

Human    80 SGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAF 144
            |.:::...:|........||.:.                |.:..|  .|.:|......|      
  Fly   436 SDRDAATKRLAFSVENILDPNKF----------------TGNKLP--SGPFGHPRQWSY------ 476

Human   145 YREKE-------------SACALSGADEQPPFHPEPRKSDCAQDKSVF----GETEEQKCSTPVY 192
            .|::|             ||..|:..|:          .|...|.|..    .||:.:|..:   
  Fly   477 ERDEEMQERLDDDQSEDMSAQDLNDMDQ----------DDMCDDGSDIDDPSSETDSKKGGS--- 528

Human   193 PWMQRMNSCNSSSFGPSG----RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 253
                 .|....|..|..|    ||.|..:|..|.:.||.:|...|||:...|:.:|.:|.|||.|
  Fly   529 -----RNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQ 588

Human   254 IKIWFQNRRMKWKKES 269
            :||||||||.||||::
  Fly   589 VKIWFQNRRTKWKKQN 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 28/55 (51%)
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 28/55 (51%)

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