DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and C15

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:233 Identity:58/233 - (24%)
Similarity:83/233 - (35%) Gaps:70/233 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    55 QQRPRAPPLPMSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFAT 119
            ||........:::...|||:                    |.|..|..||               
  Fly   124 QQEDHDLAYKLATSIANSTY--------------------GSAAALYSYP--------------- 153

Human   120 SSYYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPEPRKSDCAQDKSVFGETEE 184
             ..||.|.||:....|....|             |:.|  .||.|.........:|:        
  Fly   154 -HLYPSAAGGHVLRVPPQRTP-------------LTWA--LPPLHHAALAHQAVKDR-------- 194

Human   185 QKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 249
               ....:|..:|:.....:...|..::.|.::||.|..||||.||..:||....|..:|..|.:
  Fly   195 ---LAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKM 256

Human   250 TERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKQA 287
            |:.|:|.||||||.||::        |.:.|.|.|:||
  Fly   257 TDAQVKTWFQNRRTKWRR--------QTAEEREAERQA 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 26/55 (47%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 35/99 (35%)
Homeodomain 218..274 CDD:459649 26/55 (47%)

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