DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and HHEX

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster


Alignment Length:248 Identity:62/248 - (25%)
Similarity:93/248 - (37%) Gaps:57/248 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    58 PRAPPLPMSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFATSSY 122
            |.|..:|.:|          ||:|..|   ..|..|...|..:..............|...:|:.
  Fly    47 PHALAMPKAS----------LATGSSS---AAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAV 98

Human   123 YPPAGGGYGRAAPCDYGPAPAFYREK--------------ESACALSGADEQPPFHPE---PRKS 170
            ..|....:....|   .||..||::.              ::|...:.|..||..:.:   |...
  Fly    99 LAPTSLRFNPIYP---DPASLFYQQVLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTM 160

Human   171 DCAQDKSVFGETEEQKCSTPVYPWMQRMNSCNS--------SSFGPSGRRGRQTYTRYQTLELEK 227
            ||.      |.......:..:|        ||:        |:||...:.|:..:|..||..||.
  Fly   161 DCE------GFPNPASAAAALY--------CNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEA 211

Human   228 EFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAE 280
            .|..::||:...|..:|..|.||:||:|.||||||.||::.:  ||....||:
  Fly   212 RFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRAN--LSKRSASAQ 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 25/55 (45%)
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 24/50 (48%)

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