DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and pb

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:253 Identity:78/253 - (30%)
Similarity:102/253 - (40%) Gaps:79/253 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    61 PPLPMSSYFVNSTFP------------VTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQ 113
            ||:| |...||...|            :|.:.|  .|:...|    ..|:.|.|. :|..|..|.
  Fly    67 PPVP-SVLMVNKMTPNCDKRSADTAYWMTASEG--GFINSQP----SMAEFLNHL-SPESPKIGT 123

Human   114 DKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPEPRKSDCAQDKSV 178
            ..|..       |.||.|.....:.|....:                              ...|
  Fly   124 PVGSG-------AIGGVGVNVNVNVGVGVGY------------------------------PVGV 151

Human   179 FGETEEQKCSTPVYPWMQRMNSCNSSS------------FGPSG---RRGRQTYTRYQTLELEKE 228
            ..:|.:...|.|.||||:...:...||            |.|..   ||.|..||..|.||||||
  Fly   152 VPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKE 216

Human   229 FHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKQ 286
            ||:|:||.|.||||||.:|.|||||:|:||||||||.|:::       ||..::|:.:
  Fly   217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT-------LSKTDDEDNK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 39/55 (71%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 39/55 (71%)

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