DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB6 and H2.0

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster


Alignment Length:265 Identity:64/265 - (24%)
Similarity:98/265 - (36%) Gaps:66/265 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    66 SSYFVNSTFPVTL---ASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFATSSYYPPAG 127
            |..|.::|.|.|.   :|....|:|...|:...|.|    |.:...|.|.:....|..:|...|.
  Fly   122 SRRFGHATLPPTFTPTSSHTYPFVGLDKLFPGPYMD----YKSVLRPTPIRAAEHAAPTYPTLAT 182

Human   128 GGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFH------PEPRKSDCA------------- 173
            ....|           |::.::.........:..|.|      |.|..|..|             
  Fly   183 NALLR-----------FHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSL 236

Human   174 ----QDKSVFGETEEQKCS-TPVYPWMQRM-------------NSCNSSSFGPSGRR----GRQT 216
                |.:...|:|.:|... .|..|.....             |...::|.|.:|:|    .|..
  Fly   237 QLTQQQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAV 301

Human   217 YTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEE 281
            ::..|...||.:|...:|:|:..|.::|..|.||:.|:|:|||||||||:...:.|.:.|     
  Fly   302 FSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQ----- 361

Human   282 EEEKQ 286
              |||
  Fly   362 --EKQ 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 24/59 (41%)
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 24/59 (41%)

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