DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOXB6 and B-H2

DIOPT Version :10

Sequence 1:XP_011523029.1 Gene:HOXB6 / 3216 HGNCID:5117 Length:288 Species:Homo sapiens
Sequence 2:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster


Alignment Length:149 Identity:42/149 - (28%)
Similarity:69/149 - (46%) Gaps:33/149 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   139 GPAPAFYREKESACALSGADEQPPFHPEPRKSDCAQDKSVFGETEEQKCSTPVYPWMQRMNSCN- 202
            ||..:...::.|....|.:|            ||.      |:.::...|      |:..:|.| 
  Fly   326 GPGSSISGDQASTIDDSDSD------------DCG------GKDDDGDDS------MKNGSSANG 366

Human   203 ------SSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNR 261
                  |.|.....|:.|..:|.:|...|||.|...:||:.:.|:|:|:.|.|::.|:|.|:|||
  Fly   367 DSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNR 431

Human   262 RMKWKKESKLLSASQLSAE 280
            |.|||:::.:  ..:|.||
  Fly   432 RTKWKRQTAV--GLELLAE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB6XP_011523029.1 Homeodomain 211..267 CDD:459649 24/55 (44%)
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 24/55 (44%)

Return to query results.
Submit another query.