DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gd and CG9631

DIOPT Version :9

Sequence 1:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_650345.1 Gene:CG9631 / 41729 FlyBaseID:FBgn0027563 Length:439 Species:Drosophila melanogaster


Alignment Length:548 Identity:134/548 - (24%)
Similarity:217/548 - (39%) Gaps:151/548 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILILCIEHVTKAVAQGMPISPCPKVFQ-YRFDGSEWFGLM-AVRSPDGHQPLHIRVTLSMRG--- 67
            :|.||: ::....|..:|...|.:.|. |:.|...:.|:. |.|:  |...|...|..:..|   
  Fly     8 LLGLCL-NLKLGSALHVPQHNCERYFSYYKEDSGAYIGVFTAPRA--GVNSLSWEVVFTAHGTGE 69

  Fly    68 ------------KPTTYTQNYLGEIELLTRG----KFTHNAPVLYKIRFPKHHFPPKLLLMSANN 116
                        |...:.:.:.||     ||    :||.....|           |||:....|.
  Fly    70 ANTVGSLIPYPNKERAFEKIHSGE-----RGEVFVRFTDFGNEL-----------PKLVRAEFNG 118

  Fly   117 HVICFGSGEHSIFMTQIQLEHIRKLSFIPDKKSSLLLDPEEEEVRKTDDKPPSTPHIQFKKKPFA 181
            .|:|......:...|..:.:.:...:.|..|.:       ..|:.:....|||||  .....||.
  Fly   119 EVLCQNEEYDAPSSTMTRRQSMSTSTPISQKSA-------PREIVRQRRPPPSTP--SNDPNPFL 174

  Fly   182 QAPKEICGRIDRDLDFHLSQRTESLHVAIGEPKSSDGITSPVFVDDDEDDVLEHQFVDESEAEAI 246
            .:   |..|||.|.                |....:|. ||:.:..|                  
  Fly   175 PS---IMPRIDSDF----------------EECGVEGF-SPLQIGGD------------------ 201

  Fly   247 ESDSADSLPSITRGSWPWLAAIYVNNLTSLDFQCGGSLVSARVVISSAHCFKLFNKRYTSNEVLV 311
                     .:|||.:|||||:| ..:.:..::|..|::|.|.||::|||  ::.|  :::::.|
  Fly   202 ---------LVTRGQYPWLAALY-EGVGTATYKCVVSVISKRTVITAAHC--IYGK--SASQLWV 252

  Fly   312 FLGRHNLKNWNEEGSLAAPVDGIYIHPDFNSQLSSY------DADIAVIILKDEVRFNTFIRPAC 370
            :||||:.....|.|:....|..: :.|      |:|      |||:.:::|...:.:..:|||.|
  Fly   253 YLGRHDRNENPENGASLVSVTSV-LTP------SAYEGNPVPDADVGLLVLTSPMVYTKYIRPLC 310

  Fly   371 LWSGSSKTEYIVGERGIVIGWSFDRT-NRTRDQKLSSELPGKKSTDASAPKVVKAPIVGNAECFR 434
            ||..:.......|:.|.|.||.:||: .:||                 .||.|...:|...:|.:
  Fly   311 LWGSNMGLPPNEGDTGAVAGWGYDRSAQKTR-----------------FPKTVSVRLVPRDQCLK 358

  Fly   435 ANAHFRSLSSNRTFCAGIQAEERDTHQSGASIYTGISGAGLFIRRNNRWMLRGTVSAALPAVETP 499
            .........:.||.|||      ::...|...  |.||:.|.:.|||||.:||.||.:       
  Fly   359 EMKRAEDFITRRTVCAG------NSESHGPCF--GDSGSALIVLRNNRWYVRGVVSLS------- 408

  Fly   500 DAESSH-KLCCKNQYIIYADVAKFLDWI 526
               ..| ::|..::|:||.|||:.:||:
  Fly   409 ---PRHGEICDLSKYVIYCDVARHIDWV 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdNP_001259479.1 GD_N 27..124 CDD:292649 25/117 (21%)
Tryp_SPc 257..526 CDD:238113 82/276 (30%)
Tryp_SPc 258..526 CDD:214473 82/275 (30%)
CG9631NP_650345.1 GD_N 26..127 CDD:292649 25/118 (21%)
Tryp_SPc 198..436 CDD:238113 84/310 (27%)
Tryp_SPc 198..433 CDD:214473 83/308 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456150
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BPFK
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I3868
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D294086at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.900

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