DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gd and CG31326

DIOPT Version :9

Sequence 1:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_650344.2 Gene:CG31326 / 41728 FlyBaseID:FBgn0051326 Length:520 Species:Drosophila melanogaster


Alignment Length:561 Identity:135/561 - (24%)
Similarity:235/561 - (41%) Gaps:95/561 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILILCIEHVTKAVAQGMPISPCPKVFQYRFDGSEWFGLMAVRSPDGHQPLHIRVTLSMRGKPTTY 72
            :.:|.:..:...|...:|.:.|...|||:....::.||:.||.|:.:..     ||.::.....|
  Fly     7 VTVLLLASLINLVLGQLPRNGCSGRFQYQGYQGQYIGLVEVRHPEANNQ-----TLILQFSQQGY 66

  Fly    73 --TQNYLGEIEL-----LTRGKFTHNAPVLYKIRFPKHHFPPKLLLMSANNHVICFGSGEHSIFM 130
              .::|:|.|.|     :|:.......|:.|::.||....|||:..|..|...:|.| |.:....
  Fly    67 HDFEDYVGSISLVDDDEVTQENLRQGLPIRYRVDFPIPTIPPKITSMQLNGVQLCSG-GVYPKPR 130

  Fly   131 TQIQLEHIRKLSFIPDKKSSLLLDPEEEEVRKTDDKPPSTPHIQFKK----KPFAQAPKEICGRI 191
            |.|.|    ::::.|...|...::|:....|........:|.|.:::    :|..:...|:.||.
  Fly   131 TGITL----RITWTPSYISVFGVNPQPVPTRPRPAWQDESPQIDYRETRPSQPRLEDSGELFGRS 191

  Fly   192 DRDLDFHLSQRTESLHVAIGEPKSSDGITSPVFVDDDEDDVLEHQFVDESEAEA----------- 245
            :..|.   :.:......|..:...:.||||.   .:....|.:....:.|.:.|           
  Fly   192 NESLP---AFQNPGWGTAPQQANPNRGITSQ---PEIPSPVPQRPTPNPSRSNAPQQAVRSPVDL 250

  Fly   246 --IESDSADSLP----------------SITRGSWPWLAAIYVNNLTS-LDFQCGGSLVSARVVI 291
              .::.|::.:|                |:.||..|||.||:....:: ..|.|||:|:|...|:
  Fly   251 VPQQNPSSNGIPCGRERASTTPLIFQGKSLQRGQLPWLVAIFERRESNGPAFICGGTLISTSTVL 315

  Fly   292 SSAHCFKLFNKRYTSNEVLVFLGRHNLKNWNEEGSLAAPVDGIYIHPDFNSQLSSY-DADIAVII 355
            |:||||:...:...::.:.|.|||:.|. .:.:|.... |..:.||.:|  |...: :||:|::.
  Fly   316 SAAHCFRAPGRDLPASRLAVSLGRNTLA-IHSDGEFRG-VSQLIIHENF--QFKQFTEADLALVR 376

  Fly   356 LKDEVRFNTFIRPACLWSGSSKTEYIVGERGIVIGWSFDRTNRTRDQKLSSELPGKKSTDASAPK 420
            |.:.||:..:|.|.||||.|::.:...|.:..|.||..|.|             |..:|:.|  |
  Fly   377 LDEPVRYTDYIVPICLWSTSNRMDLPQGLKSYVAGWGPDET-------------GTGNTEVS--K 426

  Fly   421 VVKAPIVGNAECFRANAHFRSLSSNRTFCAGIQAEERDTHQSGASIYTGISGAGLFIRRNNRWML 485
            |....||..|.|.....|.  |....:.||         .::||.......|..|.:|..:.|:|
  Fly   427 VTDLNIVSEANCALELPHV--LVQPSSLCA---------KKTGAGPCASDGGGPLMLREQDVWVL 480

  Fly   486 RGTVSAALPAVETPDAESSHKLCCKNQYIIYADVAKFLDWI 526
            ||.:|..:       .......|..::..::.||||.::|:
  Fly   481 RGVISGGV-------INEKENTCELSKPSVFTDVAKHIEWV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdNP_001259479.1 GD_N 27..124 CDD:292649 28/103 (27%)
Tryp_SPc 257..526 CDD:238113 77/270 (29%)
Tryp_SPc 258..526 CDD:214473 77/269 (29%)
CG31326NP_650344.2 GD_N 26..126 CDD:292649 29/105 (28%)
Tryp_SPc 277..517 CDD:238113 79/275 (29%)
Tryp_SPc 277..514 CDD:214473 78/273 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BPFK
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I3868
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D294086at33208
OrthoFinder 1 1.000 - - FOG0001808
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.870

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