DRSC/TRiP Functional Genomics Resources

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Protein Alignment gd and CG16749

DIOPT Version :9

Sequence 1:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_649881.1 Gene:CG16749 / 41111 FlyBaseID:FBgn0037678 Length:265 Species:Drosophila melanogaster


Alignment Length:255 Identity:51/255 - (20%)
Similarity:94/255 - (36%) Gaps:61/255 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 CGGSLVSARVVISSAHCFKLFNKRYTSNEVLVFLGRHNLKNWNEEGSLAAPVDGIYIHPDFNSQL 344
            ||||::|.:.|:::|||    .....::::.|   ::.:...|..|.....|..|..|.|:| ..
  Fly    56 CGGSIISKQFVMTAAHC----TDGRKASDLSV---QYGVTKINATGPNVVRVKKIIQHEDYN-PY 112

  Fly   345 SSYDADIAVIILKDEVRFN-TFIRPACLWS---GSSKTEYIVGERGIVIGWSFDRTNRTRDQKLS 405
            ::|..||:::::::...|: ..:.|..|..   .:.:|:  .|..|::|||..:.|.......|.
  Fly   113 NNYANDISLLLVEEPFEFDGVTVAPVKLPELAFATPQTD--AGGEGVLIGWGLNATGGYIQSTLQ 175

  Fly   406 SELPGKKSTDASAPKVVKAPIVGNAECFRANAHFRSLSSNRTFCAGIQAEERDTHQSGASIYTGI 470
            .               |:..:..:.||  ...|..........|.|:.       :.|....:|.
  Fly   176 E---------------VELKVYSDEEC--TERHGGRTDPRYHICGGVD-------EGGKGQCSGD 216

  Fly   471 SGAGLFIRRNN----RWMLRGTVSAALPAVETPDAESSHKLCCKNQYIIYADVAKFLDWI 526
            ||..|......    .|.::....|..|.|                   |..|::::|||
  Fly   217 SGGPLIYNGQQVGIVSWSIKPCTVAPYPGV-------------------YCKVSQYVDWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdNP_001259479.1 GD_N 27..124 CDD:292649
Tryp_SPc 257..526 CDD:238113 49/253 (19%)
Tryp_SPc 258..526 CDD:214473 49/253 (19%)
CG16749NP_649881.1 Tryp_SPc 29..257 CDD:214473 49/253 (19%)
Tryp_SPc 30..259 CDD:238113 51/255 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456161
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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