DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gd and CG14760

DIOPT Version :9

Sequence 1:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_610366.1 Gene:CG14760 / 35802 FlyBaseID:FBgn0033277 Length:529 Species:Drosophila melanogaster


Alignment Length:549 Identity:109/549 - (19%)
Similarity:195/549 - (35%) Gaps:157/549 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AVRSPDGHQPLHIRVTLSMRGKPT-------TYTQNYLGEIELLTRGKFTHNAPVLYKIRFPKHH 104
            ||.:|..| .|..:..|.:|...|       .:..|..|: |:||..::...:.     :|.:..
  Fly    55 AVEAPKDH-VLQFKCELQLRTLSTDLKCRTEVFHFNSEGD-EVLTSSEYFCGSG-----KFERKS 112

  Fly   105 FPPKLLLMSANNHVICFGSGEHSIFMTQIQLEHIRKLSFIP------DKKSSLLLDPEEEEVRKT 163
            |        .|..||.:.|..||...:.::|:.  ||..:|      :...::.::.::.|..:.
  Fly   113 F--------LNRAVISYISSGHSEPPSAVKLKD--KLHAVPTTSTTTEAPQAVSIEEQDAEEEQE 167

  Fly   164 DDKPPSTPHIQFKKKPFAQAPKEICGRIDRDLDFHLSQRTESLHVAIGEPKSSDGI--TSPVFVD 226
            :::.|.                    ..|.||.      .|.||| :.:...||.:  .:.:..|
  Fly   168 EEEEPE--------------------EADEDLS------DEVLHV-LQDVGVSDALAYVASLLYD 205

  Fly   227 DDED---------DVLEHQFVDESEAE--AIESDSADSLPSITRG-----------------SW- 262
            .:|.         |.|..:...::.|:  .|.|....:.||...|                 .| 
  Fly   206 VEESRKSSTTIYLDKLPIRSSSKTSAKRARIVSSYPTAAPSPGHGGGRFSCLVEAFQPTCSCGWS 270

  Fly   263 --PWLAAIYVNNLTSLDFQ--------------CGGSLVSARVVISSAHCFKLFNKRYTSNEVLV 311
              |.:|:.........:|.              ||.:::..|.::|:|||| |..:..::.::.|
  Fly   271 RIPRIASPTNEEAVLHEFPPMAGVLTKKHGKVFCGAAIIHHRYLLSAAHCF-LGPETNSAAKLRV 334

  Fly   312 FLGRHNL-KNWNEEGSLAAPVDGIYIHPDFNSQLSSYDADIAVIILKDEVRFNTFIRPAC--LWS 373
            .:|.|:| .::....:....:|.:.:|.||:........|||::..:..:.::..:.|||  |..
  Fly   335 VVGEHDLASSFETFATQRYDLDALILHEDFSQASGQPKNDIAMLKTRMAIVWSQHVGPACLPLQP 399

  Fly   374 GSSKTEY-IVGERGIVIGWSFDRTNRTRDQKLSSELPGKKSTDASAP---KVVKA--PIVGNAEC 432
            |....:. :.|.:.:..||.                    :|....|   :::||  .::....|
  Fly   400 GEDGQKLPLAGHQVVAAGWG--------------------TTSYGGPQTHRLLKATLDVIDGRRC 444

  Fly   433 FRANAHFRSLSSNRTFCAGIQAEERDTHQSGASIYTGISGAGLFIRRNNRWMLRGTVSAALPAVE 497
            .:|.:....|..: |||.  ....|||.|..       ||..|:.|.|.|.|..|.||..     
  Fly   445 RQALSSAGGLPPH-TFCT--YTPGRDTCQYD-------SGGALYERINGRLMAVGIVSFG----- 494

  Fly   498 TPDAESSHKLCCKNQYIIYADVAKFLDWI 526
                    :.|...|..:...||.|:.||
  Fly   495 --------QACAAQQPSVNTRVASFIKWI 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdNP_001259479.1 GD_N 27..124 CDD:292649 18/83 (22%)
Tryp_SPc 257..526 CDD:238113 62/311 (20%)
Tryp_SPc 258..526 CDD:214473 62/310 (20%)
CG14760NP_610366.1 CUB 37..126 CDD:294042 19/85 (22%)
Tryp_SPc 281..516 CDD:238113 60/279 (22%)
Tryp_SPc 281..515 CDD:214473 58/277 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456037
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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