DRSC/TRiP Functional Genomics Resources

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Protein Alignment gd and CG32260

DIOPT Version :9

Sequence 1:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:537 Identity:120/537 - (22%)
Similarity:178/537 - (33%) Gaps:207/537 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MPISPCPKVFQ-YR----------------FDGSEWFGLMAV-RSPDGHQPLHIRVTLSMRGKPT 70
            :|::.||::.| |:                ||||.:....|. ||.:......:.||.:      
  Fly   205 LPLTSCPQLMQEYQGQANEFHTFLGQSICGFDGSTFMVCCATDRSGNARSRKDVFVTTA------ 263

  Fly    71 TYTQNYLGEIELLTRGKFTHNAPVLYKIRFPKHHFPPKLLLMSANNHVICFGSGEHSIFMTQIQL 135
                                 ||      |...||.|    :|..:      :....:|.....|
  Fly   264 ---------------------AP------FGFFHFSP----LSGGS------TATPMVFQPTPPL 291

  Fly   136 EHIRKLSFIPDKKSSLLLDPEEEEVRKTDDKPPSTPHIQFKKKPFAQAPKE--ICGRIDRDLDFH 198
            ..:...||.|                     ||..|       |...||:|  .||         
  Fly   292 SQVVSPSFYP---------------------PPPPP-------PPNNAPRESATCG--------- 319

  Fly   199 LSQRTESLHVAIGEPKSSDGITSPVFVDDDEDDVLEHQFVDESEAEAIESDSADSLPSITRGSWP 263
                             ..|.||             ::.|...||.              :|::|
  Fly   320 -----------------ISGATS-------------NRVVGGMEAR--------------KGAYP 340

  Fly   264 WLAAI-YV--NNLTSLDFQCGGSLVSARVVISSAHCFKLFNKRYTSNEVLVFLGRHNLKNWNEEG 325
            |:||: |.  ||..:|.|.|||||:.:|.||:||||   .|...|    ||.||.|:|....|.|
  Fly   341 WIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHC---INPMLT----LVRLGAHDLSQPAESG 398

  Fly   326 SLAAPVDGIYIHPDFNSQLSSYDADIAVIILKDEVRFNTFIRPACLWSGSS-KTEYIVGERGIVI 389
            ::...:....:|..|:  |:|...|||:|.|.........|.|.||...:. ..:..||....|.
  Fly   399 AMDLRIRRTVVHEHFD--LNSISNDIALIELNVVGALPGNISPICLPEAAKFMQQDFVGMNPFVA 461

  Fly   390 GWSFDRTNRTRDQKLSSELPGKKSTDASAPKVVKAPIVGNAECFRANAHFRSL-----SSNRTFC 449
            ||     ...:.|.::|::    ..||      :.|||....|.::   ::|:     .|::..|
  Fly   462 GW-----GAVKHQGVTSQV----LRDA------QVPIVSRHSCEQS---YKSIFQFVQFSDKVLC 508

  Fly   450 AGIQAEERDTHQSGASIYTGISGAGLFIRRNN----RWMLRGTVSAALPAVETPDAESSHKLCCK 510
            ||         .|......|.||..|.:.:..    |:.|.|.||....             |.:
  Fly   509 AG---------SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYE-------------CAR 551

  Fly   511 NQYI-IYADVAKFLDWI 526
            ..:. :|..||.::.||
  Fly   552 PNFPGVYTRVASYVPWI 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gdNP_001259479.1 GD_N 27..124 CDD:292649 20/114 (18%)
Tryp_SPc 257..526 CDD:238113 77/282 (27%)
Tryp_SPc 258..526 CDD:214473 77/281 (27%)
CG32260NP_728942.1 CLIP 194..244 CDD:288855 9/38 (24%)
Tryp_SPc 327..568 CDD:214473 80/303 (26%)
Tryp_SPc 328..571 CDD:238113 82/304 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456171
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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