DRSC/TRiP Functional Genomics Resources

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Protein Alignment cac and Catsper3

DIOPT Version :9

Sequence 1:NP_001356945.1 Gene:cac / 32158 FlyBaseID:FBgn0263111 Length:2110 Species:Drosophila melanogaster
Sequence 2:NP_001239416.1 Gene:Catsper3 / 76856 MGIID:1924106 Length:395 Species:Mus musculus


Alignment Length:399 Identity:81/399 - (20%)
Similarity:174/399 - (43%) Gaps:71/399 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 RAEKRFRFWIRHTVKTQWFYWFVIVLVFLNT-VCVAVEHYG-QPSFLTEFLYYAEFIFLGLFMSE 487
            |.:|..:.:.|..:|:.:|...:|..|..|: :.|...:|. |..|...| ..:|..|:.:::.|
Mouse    34 RKDKECQAYFRKVIKSTFFQIVMITTVTTNSFLLVLGTNYDIQFEFFRTF-EVSELFFVSVYVCE 97

  Fly   488 MFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGG-SFGLSVLRALRLLRIFKVTKYWS 551
            ..:|:| :.|..|::..:|..|.:::.......:..::||. |..|.....::.|||.|:..|..
Mouse    98 FLMKVY-VDPITYWKDGYNILDVIILIILTIPYLLRKIKGNHSAYLHFADGIQSLRILKLISYSR 161

  Fly   552 SLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFG----GQFNLPGGTPETNFNTFPIALL 612
            .:|.|:|::..::.::.|:|.||||.:.:||:||..|||    |...        |:.....|..
Mouse   162 GIRTLIIAVGETVYTVASVLTLLFLLMFVFAILGFCLFGVTDRGDLE--------NWGNLASAFF 218

  Fly   613 TVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANA---- 673
            |:|.:.|.:.|.::.     .:...:|..:...:.|:.:|..::..||:|:.:.:.:..::    
Mouse   219 TLFSLATVDGWTDLQ-----EELDKRKFTVSRAFTILFILLASFIFLNMFVGVMIMHTEDSMKKF 278

  Fly   674 -QELTAAEEEQVEEDKEKQLQELEKEMEALQADGVHVENGDGAVAPSKSKGKKKEEEKKEEEEVT 737
             ::||......:.|:|:..|:..::|:..|.                    ..::.......::.
Mouse   279 ERDLTLERNLAIMEEKQIILKRQQEEVNRLM--------------------NTQKSGSMNFIDMV 323

  Fly   738 EGPKPMLPYSSMFILSPTNPIRRGAHWVVNLPYFDFFIM------VVIS---------MSSIALA 787
            ||.|..|.::...:|.         .:..:|.:.|.:::      |::|         ::.::|.
Mouse   324 EGFKKTLRHTDPMVLD---------DFSTSLSFIDIYLVTLDNQDVIVSKLQELYCEIVNVLSLM 379

  Fly   788 AEDPVRENS 796
            .||..:|:|
Mouse   380 LEDMPKESS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cacNP_001356945.1 Ion_trans 37..324 CDD:334124
Ion_trans 441..677 CDD:334124 56/247 (23%)
Ion_trans 769..1050 CDD:334124 8/43 (19%)
Ion_trans 1094..1345 CDD:334124
GPHH 1346..1416 CDD:339854
Ca_chan_IQ 1418..1492 CDD:337190
Catsper3NP_001239416.1 Ion_trans 49..269 CDD:366146 56/234 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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