DRSC/TRiP Functional Genomics Resources

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Protein Alignment cac and Catsper1

DIOPT Version :9

Sequence 1:NP_001356945.1 Gene:cac / 32158 FlyBaseID:FBgn0263111 Length:2110 Species:Drosophila melanogaster
Sequence 2:XP_038957256.1 Gene:Catsper1 / 689349 RGDID:1593515 Length:678 Species:Rattus norvegicus


Alignment Length:468 Identity:103/468 - (22%)
Similarity:199/468 - (42%) Gaps:70/468 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 SGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTE--------EEKMH 369
            |||..:.:|:     ..|::.:||:.:|..:...|...:..:.:..::|...        ..|.|
  Rat   189 SGEEYQNQER-----SGLQVGQQQEGQRASSKRGEHRRRRGDYLKYKDRIRHRRPSASQLSHKSH 248

  Fly   370 IMEARRRNAAKRKKLKSLGKS------------KSTDTEEEEAEEDYGDDGYLKTRSKPQ----G 418
            ..|....:..:.|.|.|:.:|            .|.|:.:|..  .:.|:.:::.|.|.|    .
  Rat   249 STEGTSPSHMRSKSLASMPQSHLGVQSYVSSQVHSGDSLKESV--SWSDEDHVQKRKKAQRTHKK 311

  Fly   419 SCTG-----FWRAEKRFRFWIRHTVKT----QWFYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLY 474
            :.:|     .|....:....:|..:.|    ..|..|:.::|.|||:.:..:.:.:.....|:.:
  Rat   312 AHSGNVFHLIWEKISQLLLGLRQMLLTLTQSLCFETFIFLVVCLNTIVLVAQTFTELEIRGEWYF 376

  Fly   475 YA-EFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFG------- 531
            .. :.|||.:::.|.|:|:.|||.. ||...:|..|..::..:..:.:..::...|:.       
  Rat   377 MVLDSIFLSIYVIEAFLKLIALGME-YFYDPWNNLDFFIMVMAALDFVLLQINSLSYSFYNHSMF 440

  Fly   532 --LSV---LRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGG 591
              |.|   :||||.:|:.:.....:||..:..:|..|:.||.::|.|:|..:.:|:::...||  
  Rat   441 RILKVFKSMRALRAIRVLRRLSILTSLHEVTGTLSGSLPSITAILSLMFTCLFLFSVVLRALF-- 503

  Fly   592 QFNLPGGTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNY 656
            |.:.|     ..||.....|.|:|.:||.:||:      :|......:|..|.|..:|:.:...|
  Rat   504 QESDP-----KRFNNIFTTLFTLFTMLTLDDWS------LIYIDNRAQGAWYIIPILVIYIIIQY 557

  Fly   657 TL-LNVFLAIAVDN--LANAQELTAAEEEQVEEDKEKQLQELEKEMEALQADGVHVENGDGAVAP 718
            .: ||:.:|:.|||  :|..:.|...::||.....||.|.:...::.....|....|........
  Rat   558 FIFLNLVIAVLVDNFQMALLKGLEKVKQEQAARVHEKLLDDSLTDLNKADPDAQMTEETLKTQLI 622

  Fly   719 SKSKGKKKEEEKK 731
            .:..|...|:::|
  Rat   623 ERMFGNMTEKQRK 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cacNP_001356945.1 Ion_trans 37..324 CDD:334124 4/10 (40%)
Ion_trans 441..677 CDD:334124 64/251 (25%)
Ion_trans 769..1050 CDD:334124
Ion_trans 1094..1345 CDD:334124
GPHH 1346..1416 CDD:339854
Ca_chan_IQ 1418..1492 CDD:337190
Catsper1XP_038957256.1 KLF1_2_4_N <86..163 CDD:425360
Ion_trans 342..573 CDD:395416 63/244 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341764
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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