Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317189.1 | Gene: | SCN8A / 6334 | HGNCID: | 10596 | Length: | 1980 | Species: | Homo sapiens |
Alignment Length: | 1922 | Identity: | 477/1922 - (24%) |
---|---|---|---|
Similarity: | 810/1922 - (42%) | Gaps: | 496/1922 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
Fly 147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKLVKE 211
Fly 212 GESETPCN-TDNILEKATGSF----------------------VCNNTTS--------MCLEKWE 245
Fly 246 GPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLG 310
Fly 311 VLSGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILA----------EERTTEE 365
Fly 366 E---------------KMHIMEAR-RRNAAKRKKLKSLG------------KSKSTD-------- 394
Fly 395 ------------------------------------------------TEEEEAEEDYG------ 405
Fly 406 ---DDGYLKTRSKPQGSC----TGFWRAEKRFRFW--IRHTVKTQ-------------------- 441
Fly 442 --------------------------------------------------------------WF- 443
Fly 444 ------------YWF------------------VIVLVFLNTVCVAVEHYGQPSFLTEFLYYAEF 478
Fly 479 IFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRI 543
Fly 544 FKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQF-------NLPGGTPE 601
Fly 602 TNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAI- 665
Fly 666 ----AVDNLANAQE---------------------------LTAAEEEQVEEDKEKQLQEL-EKE 698
Fly 699 MEA--------LQADGVHVENGDGAVA-------------------------------------- 717
Fly 718 ------------PSKSKGKKKE---------EEKKEEEEV-TEGPKPMLPYSSMFILSPTNPIRR 760
Fly 761 ------------GAHW---------VVNLPYFDFFIMVVISMSSIALAAED-PVRENSRRNKILN 803
Fly 804 YFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLST 868
Fly 869 IKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC 933
Fly 934 TDESKHTSAECQGSYFKYEEDELLP--KQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVLQ 996
Fly 997 HSMAATYEDRGPIQNFRIEMSIFYIVYFIVF----PFFFVNIFVALIIITFQEQ-----GEAELQ 1052
Fly 1053 DGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMK 1115
Fly 1116 YHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKN-FFKDPWNIFDLITVLGSIV-----DA 1174
Fly 1175 LWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIG 1239
Fly 1240 MQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACL-KGKACDDDAEKAPGE 1303
Fly 1304 ----YCGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEY 1362
Fly 1363 DPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIREN 1427
Fly 1428 LSIKMRAPEEMD--QADMELRETITNIWPLQAKKMLNLLVPPSDQLNKGKLSVGKIYAGFLILES 1490
Fly 1491 W--RSTRFGQLDSGMPMLELQDASRHPSQESLTGADA 1525 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 85/317 (27%) |
Ion_trans | 441..677 | CDD:334124 | 84/387 (22%) | ||
Ion_trans | 769..1050 | CDD:334124 | 98/292 (34%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 82/262 (31%) | ||
GPHH | 1346..1416 | CDD:339854 | 20/69 (29%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 15/77 (19%) | ||
SCN8A | NP_001317189.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..20 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 28..62 | ||||
I. /evidence=ECO:0000305 | 114..442 | 96/362 (27%) | |||
Ion_trans | 131..421 | CDD:395416 | 85/316 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 446..530 | 18/83 (22%) | |||
Na_trans_cytopl | 504..702 | CDD:403218 | 15/197 (8%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 568..602 | 4/33 (12%) | |||
II. /evidence=ECO:0000305 | 735..1007 | 83/280 (30%) | |||
Ion_trans | 752..965 | CDD:395416 | 70/221 (32%) | ||
Na_trans_assoc | 991..1192 | CDD:399489 | 30/203 (15%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1107..1148 | 9/40 (23%) | |||
III. /evidence=ECO:0000305 | 1180..1495 | 105/330 (32%) | |||
Ion_trans | 1197..1473 | CDD:395416 | 97/287 (34%) | ||
Na_channel_gate | 1465..1517 | CDD:240441 | 11/55 (20%) | ||
IV. /evidence=ECO:0000305 | 1504..1801 | 94/303 (31%) | |||
Ion_trans | 1522..1776 | CDD:395416 | 82/260 (32%) | ||
GPHH | 1788..1835 | CDD:407139 | 17/51 (33%) | ||
IQ | 1894..1915 | CDD:197470 | 4/22 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1922..1980 | 8/30 (27%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R175 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |