Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001034914.1 | Gene: | scn4aa / 572442 | ZFINID: | ZDB-GENE-051201-2 | Length: | 1829 | Species: | Danio rerio |
Alignment Length: | 1842 | Identity: | 478/1842 - (25%) |
---|---|---|---|
Similarity: | 824/1842 - (44%) | Gaps: | 351/1842 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
Fly 147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTC----------YS 201
Fly 202 LEDPNKLVKEGESETPCN-TDN--------------ILEKATGSFVCNNTTS--------MCLEK 243
Fly 244 WEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLV 308
Fly 309 LGVLS--------GEFAKEREKVENRQEFLKLRRQQQ---------------------------- 337
Fly 338 --LERELNGYVEWICKAEEVILAEERTTEEEKMHIMEARRRNAAKRKKL-KSLGKSKSTDTEEEE 399
Fly 400 AEEDYGDDGYLKTRSKPQG-----------SCTGFWRAEKRFRFWIRHTVKTQWFYWFVIVLVFL 453
Fly 454 NTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIF 518
Fly 519 EVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFAL 583
Fly 584 LGMQLFGGQF-------NLPGGTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGM 641
Fly 642 IYSIYFIVLVLFGNYTLLNVFLAIAV-----DNLANAQE-----------------------LTA 678
Fly 679 AEEEQV---EEDKEKQLQELEKEMEAL-------QADGV-------------------------- 707
Fly 708 ---------HVENGDGAVAPSKSKGKKKEEEKKEEEEVTEGPKPMLPYSSMFILSPTNPIRR--- 760
Fly 761 ---------GAHW---------VVNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNK-ILNYFD 806
Fly 807 YAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKS 871
Fly 872 LRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC--- 933
Fly 934 TDESK------HTSAECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWP 992
Fly 993 QVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIITFQEQ----GEAELQD 1053
Fly 1054 GEIDKNQKSCIDFTIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHN 1118
Fly 1119 QGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKN-FFKDPWNIFDLITVLGSIV-----DALWM 1177
Fly 1178 EFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQV 1242
Fly 1243 FGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKG--KACDDDAEKAPGE-- 1303
Fly 1304 --YCGST-LAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDS-SILGAHHLDEFVRIWAEYDP 1364
Fly 1365 NATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENL- 1428
Fly 1429 -SIKMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVPPSDQLNKGKLSVGKIYAGFLILESWR 1492
Fly 1493 STRFGQLDSGMPMLELQDASRHPSQESLTGADAGHLHPGHSYMNGHRRSPSLRHNGSPLARSPSP 1557
Fly 1558 RRRGHQYIHHDIGFSDTVSNVVEMVKETRHPRHGNSHPRYPRGSWSAST-SPARSPSPSRYGGHL 1621
Fly 1622 SRSKRTQLPYPTYGTTSLCQRS 1643 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 90/327 (28%) |
Ion_trans | 441..677 | CDD:334124 | 80/270 (30%) | ||
Ion_trans | 769..1050 | CDD:334124 | 96/294 (33%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 81/264 (31%) | ||
GPHH | 1346..1416 | CDD:339854 | 21/69 (30%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 16/75 (21%) | ||
scn4aa | NP_001034914.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 32..52 | ||
I. /evidence=ECO:0000305 | 106..421 | 89/332 (27%) | |||
Ion_trans | 149..424 | CDD:278921 | 80/291 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 446..468 | 0/21 (0%) | |||
II. /evidence=ECO:0000305 | 564..836 | 85/283 (30%) | |||
Ion_trans | 599..794 | CDD:278921 | 67/203 (33%) | ||
Na_trans_assoc | 820..992 | CDD:284034 | 28/176 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 901..957 | 11/56 (20%) | |||
III. /evidence=ECO:0000305 | 979..1292 | 101/330 (31%) | |||
Ion_trans | 1014..1270 | CDD:278921 | 87/272 (32%) | ||
Na_channel_gate | 1262..1314 | CDD:240441 | 10/52 (19%) | ||
Important for rapid channel inactivation. /evidence=ECO:0000250|UniProtKB:P15390 | 1276..1278 | 0/1 (0%) | |||
IV. /evidence=ECO:0000305 | 1301..1599 | 90/304 (30%) | |||
Ion_trans | 1336..1575 | CDD:278921 | 73/245 (30%) | ||
GPHH | 1584..1641 | CDD:293510 | 20/61 (33%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1765..1786 | 7/22 (32%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |