Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038935723.1 | Gene: | Cacna1i / 56827 | RGDID: | 68944 | Length: | 2226 | Species: | Rattus norvegicus |
Alignment Length: | 2280 | Identity: | 555/2280 - (24%) |
---|---|---|---|
Similarity: | 895/2280 - (39%) | Gaps: | 679/2280 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 PKKEENP----PGGGPTSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGG 64
Fly 65 DKTVLAQK---LEKTEAYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYP 126
Fly 127 QIGPEVDLRTLRAIRVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFY 191
Fly 192 SGALHKTCY-----------------------------SLEDPNKL--------VKEGESETPCN 219
Fly 220 TDNILEKATG------SFVC---NNTTSMCLEKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTA 275
Fly 276 ILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFA--KERE---KVENRQEFLKLRRQ 335
Fly 336 QQLERELNGYVE---WIC----KAE---------------------------------------- 353
Fly 354 -----------------EVILAEERTTEEEKMHIMEARRRNAAKRKKLKSLGKSKSTDTEEE--- 398
Fly 399 ---EAEEDYGDDGYLKTRSKPQGS---------------------CTGFWRAEKRFRFWIRHTVK 439
Fly 440 TQWFYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESS 504
Fly 505 FNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIIS 569
Fly 570 LLFLLFLFILIFALLGMQLFGGQFNLPGGTPET-----NFNTFPIALLTVFQILTGEDWNEVMYQ 629
Fly 630 GIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEEEQVEEDKEKQLQE 694
Fly 695 LEKEME-------------------------------------------ALQADGVHV------- 709
Fly 710 ---------------------------------------------------------ENGDGAV- 716
Fly 717 --------APSKS---------------------------------------------------- 721
Fly 722 ---------------------------------KGKKKEE---------------EKKEEEEVTE 738
Fly 739 GPKPMLPYSSMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAEDP-VRENSRRNKIL 802
Fly 803 NYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLS 867
Fly 868 TIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFY 932
Fly 933 C--TDESKHTS-AECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQV 994
Fly 995 LQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIITF---QEQGEAELQDGEI 1056
Fly 1057 DKNQKSCIDFTIGARPLERYMPKNRNTFKYKVW---RIVV-----STPFEYFIMMLIVFNTLLLM 1113
Fly 1114 MKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVLGSIVDALWME 1178
Fly 1179 FGSNS---IN---VGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAI 1237
Fly 1238 IGMQVFGNIKLGTVEN---SITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKACDDDAEK 1299
Fly 1300 APGEYCGSTLAYA---YFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAE 1361
Fly 1362 YDPNATGKIHYTEMYDMLKNMDP---------PLGFGNKCPN----------------------- 1394
Fly 1395 ------RLAYKK------LIRMNMPLDDELRVQFTTTLFALIRENLSIKM----RAPEEMDQADM 1443
Fly 1444 ELRETITNIWPLQAKKMLNLLVPPSDQLNKG---KLSVGKIYAGFLILESWRSTRFGQLDSGMPM 1505
Fly 1506 LELQDASRHPS--QESLTGADAGHLHPGHSYMNGHRRSPSLRHNGSPLARSPS---------PRR 1559
Fly 1560 RGHQYIHHDIG------FS-DTVSNVVEMVKETRHP---------RHGNSHPRYPR----GSWSA 1604
Fly 1605 STSP---------------ARSPSPSRYGGH----------LSRSKR------TQLPYPTYGTTS 1638
Fly 1639 LCQRSRSPSPARLQEMRERDRL--------------GYGIDMGVTHVQHSYPTLASRRAGIGRR- 1688
Fly 1689 -------------------LPPTPSKPSTLQLKPTNINFPKLNASPTHTHHSTPHSVHSLPHHRD 1734
Fly 1735 LLRDP 1739 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 106/340 (31%) |
Ion_trans | 441..677 | CDD:334124 | 89/240 (37%) | ||
Ion_trans | 769..1050 | CDD:334124 | 83/287 (29%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 91/262 (35%) | ||
GPHH | 1346..1416 | CDD:339854 | 13/113 (12%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 16/80 (20%) | ||
Cacna1i | XP_038935723.1 | Ion_trans | 76..407 | CDD:395416 | 105/335 (31%) |
Ion_trans | 597..824 | CDD:395416 | 88/237 (37%) | ||
Ion_trans | 1128..1400 | CDD:395416 | 82/285 (29%) | ||
Ion_trans | 1445..1700 | CDD:395416 | 91/278 (33%) | ||
PHA03307 | 1833..>2066 | CDD:223039 | 54/249 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |