Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005171642.1 | Gene: | scn4ab / 564977 | ZFINID: | ZDB-GENE-051201-1 | Length: | 1835 | Species: | Danio rerio |
Alignment Length: | 1804 | Identity: | 481/1804 - (26%) |
---|---|---|---|
Similarity: | 801/1804 - (44%) | Gaps: | 436/1804 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 FILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFLCI 83
Fly 84 FCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPLKL 148
Fly 149 VSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCY------------- 200
Fly 201 ---------------SLEDPNKLVKEGES--ETPCNTDNILEKATGSFVCNNTTS--------MC 240
Fly 241 LEKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFML 305
Fly 306 NLVLGVLSGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTEEEKMHI 370
Fly 371 MEARRRNAAKRKKL-----KSLGKSKSTDTEEEEAEEDYGDDGY-LKTRSKPQGS---------- 419
Fly 420 --------------------------CTGFWRAEKRFRF------------WIRHTVKTQWFYWF 446
Fly 447 VI---------VLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFE 502
Fly 503 SSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSI 567
Fly 568 ISLLFLLFLFILIFALLGMQLFGGQF-------NLPGGTPETNFNTFPIALLTVFQILTGEDWNE 625
Fly 626 VMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEEEQVEEDKEK 690
Fly 691 QLQ-------------------------ELEKEMEALQADG------------------VHVENG 712
Fly 713 D-------GAVAPSKSKG-----KKK-----------------EEEKKEEEEVTEGPKPMLPYSS 748
Fly 749 MFILSPTNPIRR------------GAHW---------VVNLPYFDFFIMVVISMSSIALAAEDPV 792
Fly 793 RENSRRNK-ILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFD 856
Fly 857 MSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVI 921
Fly 922 GVQLFNGKFFYCTDESK---------HTSAECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAA 977
Fly 978 AMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIIT 1042
Fly 1043 FQEQGEAELQDGEI--DKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMM 1103
Fly 1104 LIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVL 1168
Fly 1169 GSIV-----DALWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLI 1228
Fly 1229 AMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKA- 1292
Fly 1293 CDDDAEKAPGE----YCGSTLAYAYFVSFIFFCSFLML------NLFVAVIMDNFDYLTRDSS-I 1346
Fly 1347 LGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDE 1411
Fly 1412 LRVQFTTTLFALIRENLSIKMRAPEEMD--QADMELR-----------ETITNIWPLQAKK---- 1459
Fly 1460 -----------MLNLLVPPSDQLNKGKL-----------SVGKIYAGFLILESWRS--------- 1493
Fly 1494 -------------TRFGQLDSGMPMLELQ-DASRH----PSQESLTGAD 1524 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 90/324 (28%) |
Ion_trans | 441..677 | CDD:334124 | 81/251 (32%) | ||
Ion_trans | 769..1050 | CDD:334124 | 98/290 (34%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 81/266 (30%) | ||
GPHH | 1346..1416 | CDD:339854 | 18/69 (26%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 22/112 (20%) | ||
scn4ab | XP_005171642.1 | Ion_trans | 199..481 | CDD:278921 | 83/335 (25%) |
Ion_trans | 637..832 | CDD:278921 | 67/203 (33%) | ||
Na_trans_assoc | 858..1018 | CDD:284034 | 28/168 (17%) | ||
Ion_trans | 1041..1298 | CDD:278921 | 90/273 (33%) | ||
Na_channel_gate | 1290..1342 | CDD:240441 | 11/52 (21%) | ||
Ion_trans | 1364..1602 | CDD:278921 | 75/248 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |