Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956426.2 | Gene: | scn1laa / 393101 | ZFINID: | ZDB-GENE-040426-751 | Length: | 1955 | Species: | Danio rerio |
Alignment Length: | 1938 | Identity: | 475/1938 - (24%) |
---|---|---|---|
Similarity: | 798/1938 - (41%) | Gaps: | 525/1938 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 KKEENPPGGGPTSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVL 69
Fly 70 AQKLEKTEAYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDL 134
Fly 135 RTLRAIRVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTC 199
Fly 200 -YSLEDPNKLVKEGESETPC-----------NTDN--ILEKATGSFVCNNTTS--------MCLE 242
Fly 243 KWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNL 307
Fly 308 VLGVLSGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVI-----------LAEER 361
Fly 362 T---TEEEKMHIMEARRRNAAKRKKLKSLGKSKSTDTEEE------------------------- 398
Fly 399 -------------------------------EAEEDYGDDG--------------YLKTR----- 413
Fly 414 ----------------------------------------------------------------- 413
Fly 414 --------------------------SKPQGS-------------CTGFWRAEKRFRF------- 432
Fly 433 -----WIR-----HTVKTQWFY-WFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMS 486
Fly 487 EMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWS 551
Fly 552 SLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQFNLPGG-----------TPETNFN 605
Fly 606 TFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAI----- 665
Fly 666 AVDNLA---------------------------------------------------NAQE---- 675
Fly 676 -----------------------------LT-----AAEEEQVE----EDKEKQLQELEKEMEAL 702
Fly 703 QADGVHVENGDGAVAPSKSKGKKKEE--EKKEEEEVTEGPKPMLP------------------YS 747
Fly 748 SMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNK-ILNYFDYAFTG 811
Fly 812 VFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLR 876
Fly 877 VLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC---TDESK 938
Fly 939 --------HTSAECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVL 995
Fly 996 QHSMAATYEDRGPIQNFRIEMSIFYIVYFIVF----PFFFVNIFVALIIITFQEQ-----GEAEL 1051
Fly 1052 QDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMM 1114
Fly 1115 KYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVLGSIV-----DA 1174
Fly 1175 LWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIG 1239
Fly 1240 MQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKACDDDAEK----- 1299
Fly 1300 -APGEYCGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAE 1361
Fly 1362 YDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRE 1426
Fly 1427 NLSIKMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVPPSDQLNK--GKLSVGKIYAGF---L 1486
Fly 1487 ILESWRSTR---------FGQLDSGMPM-----LELQDA----SRHPSQESLT 1521 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 90/308 (29%) |
Ion_trans | 441..677 | CDD:334124 | 82/336 (24%) | ||
Ion_trans | 769..1050 | CDD:334124 | 91/301 (30%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 84/262 (32%) | ||
GPHH | 1346..1416 | CDD:339854 | 21/69 (30%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 15/78 (19%) | ||
scn1laa | NP_956426.2 | Ion_trans | 150..416 | CDD:278921 | 84/287 (29%) |
Na_trans_cytopl | 483..594 | CDD:288761 | 9/110 (8%) | ||
Ion_trans | 749..945 | CDD:278921 | 64/207 (31%) | ||
Na_trans_assoc | 972..1161 | CDD:284034 | 28/198 (14%) | ||
Ion_trans | 1184..1438 | CDD:278921 | 83/278 (30%) | ||
Na_channel_gate | 1430..1482 | CDD:240441 | 10/55 (18%) | ||
Ion_trans | 1504..1742 | CDD:278921 | 77/243 (32%) | ||
GPHH | 1752..1801 | CDD:293510 | 18/53 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |