DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cac and Ca-alpha1T

DIOPT Version :9

Sequence 1:NP_001356945.1 Gene:cac / 32158 FlyBaseID:FBgn0263111 Length:2110 Species:Drosophila melanogaster
Sequence 2:NP_001259267.1 Gene:Ca-alpha1T / 31550 FlyBaseID:FBgn0264386 Length:3218 Species:Drosophila melanogaster


Alignment Length:3009 Identity:558/3009 - (18%)
Similarity:893/3009 - (29%) Gaps:1413/3009 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PGGGPTSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQK--- 72
            ||....|:..||:....|.:...:|..|.||...:|.|:.||:.|.:  :.|..|...:..:   
  Fly   274 PGFPEISIRALTQYTRPRNWCLMLITNPWFERVSILVILLNCITLGM--YQPCVDDACVTNRCKI 336

  Fly    73 LEKTEAYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTL 137
            |:..:......|.:|.::|::|:| :..|::||.:.||.:|||:|:.|.: :|......::|..:
  Fly   337 LQIFDDIIFAFFALEMTIKMVAMG-ICGKNTYLADSWNRLDFFIVLAGLL-EYVMHVENLNLTAI 399

  Fly   138 RAIRVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTC--- 199
            |.|||||||:.::.|||:::::..::..:..|..:.||..|...||.|||::.:.|.|.:.|   
  Fly   400 RTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWEGILRQRCSLM 464

  Fly   200 ------YSLEDP---------NKLVK----EGESETPCNT---------DNILEKATGSFVCN-- 234
                  |.|..|         |.|.:    ..:.:..|:|         .|......||.|||  
  Fly   465 RTEGMVYPLTVPEVYRVRVRVNSLSQYYEFSKDQDYICSTPNDSGMHLCGNFPPYRIGSLVCNEE 529

  Fly   235 ----------NTT--------SMCLEKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTN 281
                      ||:        :.|.:..|.|..|..||||||.|.:.:|..|::||||.|:|:..
  Fly   530 AKLFDFNEPTNTSCVNWNQYYTTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQ 594

  Fly   282 DALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFA--KEREKVENRQE---------------- 328
            || .|.::|||||.|||||||||:||.|.|::.:|:  |:||....|||                
  Fly   595 DA-HSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTSTLASSTNN 658

  Fly   329 ------------------------------FLKLRRQQQLE------------------------ 339
                                          ..|.:|||:.|                        
  Fly   659 SEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRKEGLLPNADNLTFSPSRIKCHHPKCP 723

  Fly   340 ----------------------------------------------------------------- 339
                                                                             
  Fly   724 KYSNRKPSSIQDQMITVMVPLNSASNNINNNNNNNSNSSNHNGSGNHTAAGGGNNNNNNNNNNAA 788

  Fly   340 --------RELNG---------------------------------------------------- 344
                    ..:||                                                    
  Fly   789 SCTTVALVNGINGSAASVTMSSAHHQQHQLLQHQQQQHQNQQQQQQQQQHSSSDNTEQSLAPDGL 853

  Fly   345 ------------------------------YVEWICKAEEVIL---------------------A 358
                                          :.:.:..:|::||                     |
  Fly   854 PRSSSLKKSTAHHQLKPEGSAAEQKTILLKFPQQMIDSEQLILQLGNLGKSHPCTSGFLSPPTSA 918

  Fly   359 EER-------------------------------------------------------------- 361
            ..|                                                              
  Fly   919 SRRPSVMFNEYVLLHTPPALNADPATAGTTTTVAPTVATVAGTAAAAAAAAATGSGSGNNNHQNG 983

  Fly   362 ----------TTEE------EKM------------------------------------------ 368
                      |||:      |||                                          
  Fly   984 GASGGAGTGGTTEKSNIFSTEKMTQAGDGSIWQVNLPQTIGTIANPYADCSELGIHDAMTCQELL 1048

  Fly   369 -----------------------------HIMEARRRNAAKRKKLKSLGKSKST----------- 393
                                         |..||.|  |..:.:....|::::|           
  Fly  1049 AFSVAFSAALPTGQSTLESFYTSLARCDPHTAEALR--AHHKPRSVPTGQNQTTPGAEGATVMVA 1111

  Fly   394 ----DT----------------------------------------------------------- 395
                ||                                                           
  Fly  1112 STAGDTGQTLQPSTVSAVVGGTIDSHAANHRRKEHHQQSHHHHNNNNTTSHSRNYRSRQGQGNSR 1176

  Fly   396 -EEEEAE-----EDYGD------------DGYLKTRSKPQGSCTGFWRAEKRFRFW----IRHTV 438
             .|..|.     |||..            |...:.||.........:|...|...|    ||..|
  Fly  1177 MREPRAPTGNYMEDYACCYDLYQNALSPLDERPRQRSPTTRCLISVYRCMSRVCSWIRRYIRRLV 1241

  Fly   439 KTQWFYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFES 503
            :.::|...:::.:.:||:.:.:|::.||..||..:..:..:|.|:|..||.:|:.|.||..|..:
  Fly  1242 EHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEMLLKVVAEGPFRYIAN 1306

  Fly   504 SFNRFDCVVISGSIFEV----IWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSM 564
            .||.||.:::..|..|:    :.:...||..||||||..|||||.|:.::..:||..:..:|.:|
  Fly  1307 GFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTM 1371

  Fly   565 RSIISLLFLLFLFILIFALLGMQLFGGQF----------------NLPGGTPE-----TNFNTFP 608
            .::.....||.|||.||::|||.||||:|                .:....|:     .:||...
  Fly  1372 DNVAVFFSLLVLFIFIFSILGMYLFGGKFCKFLDESGLERECTCPEIISRHPQCECDRKHFNNIL 1436

  Fly   609 IALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIY-SIYFIVLVLFGNYTLLNVFLAIAVD---- 668
            .|.:|||||||.||||.|::.|:      :|...: ::||:.|:.||||.|.|:.:||.|:    
  Fly  1437 WATVTVFQILTQEDWNVVLFNGM------EKTSHWAALYFVALMTFGNYVLFNLLVAILVEGFSS 1495

  Fly   669 ----------------------------------------------------------------- 668
                                                                             
  Fly  1496 ERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSYYEVRNRWRSAEDVRKLQD 1560

  Fly   669 ----------------------------------------------------------------- 668
                                                                             
  Fly  1561 SVELIIEAKSNMHRQRLLQPTHDYQINELPASSAAPSASGTSGASAPGDRERDRDRDRDRERDRD 1625

  Fly   669 ----------------------------------------------------------------- 668
                                                                             
  Fly  1626 RDRERDREAGGGGKEEGAQHAKPRGGLKKTYSIKERRSEAPRLSKIRLARDPPIITTTAATPQDS 1690

  Fly   669 --------------------------------------------------------------NLA 671
                                                                          |:.
  Fly  1691 PSTTLEPGMSFRQWGDMEPPSPPSPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNIL 1755

  Fly   672 NAQEL----------------------------------------------TAAEEEQVE----- 685
            ||.:|                                              ||..:.|..     
  Fly  1756 NASQLGVGMGGGVPSTAGSSSSMHSVIIDDISKSSSSTAAATPIYVPTISSTADAQSQSHSLNDV 1820

  Fly   686 ----------------------------------------------------------------- 685
                                                                             
  Fly  1821 SVGSSPGGEIPATGMSRNANTGASTSGSSSSERLPLAPPPQQGSFKQRLRRGSSKKRRASALALA 1885

  Fly   686 ----------EDKEKQLQELEKEMEALQADGVH---VENGDGAVAPS------------------ 719
                      :::.::.|:.|:|.:.|...|.:   :.|.:..|:.|                  
  Fly  1886 TDDNPARRTLDNQARRTQDEEEEQQQLNNGGDNSCLLRNSNAVVSGSSSGTKETNRLSPQNSIRR 1950

  Fly   720 ----------------------------------------------------------------- 719
                                                                             
  Fly  1951 LSNTLSIGSGPVGSRRASACIFNSQVYQNLNQPPKLRPGSGQRRMSSIELAFSKTSHLNLHNLEA 2015

  Fly   720 ------------------KSKG----------------------------KKKEEEK-------- 730
                              ||.|                            ||:.|||        
  Fly  2016 NRKSLSYTNSKMDLDKWNKSYGNLNEPDNMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQL 2080

  Fly   731 ------------------------------KEEEEVTEGPKPMLP-----YS------------- 747
                                          |:::::...|..|:|     ||             
  Fly  2081 HQQQLLQQRQDSFSSTTQQQQQQLQQHRLSKDQQQLAMQPHSMVPGGGERYSKLKMLIEQLTPKH 2145

  Fly   748 --------SMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAEDP-VRENSRRNKILN 803
                    |::|....|..|:...|.||..:||..:::.|:::.|.||.|.| :..:|.....|.
  Fly  2146 FTTEREDYSLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMERPNIPPSSTERLFLA 2210

  Fly   804 YFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLST 868
            ..:|.||.|||:||.:|:|..|:.....:|....|||||..:|..:.:.....:...|:.:....
  Fly  2211 TANYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGI 2275

  Fly   869 IKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC 933
            ::..|:||.||||:.|.|.|.||.|...:::||:.:.||:::...|..||.::|||||.|.|:||
  Fly  2276 LRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFYYC 2340

  Fly   934 TDES---KHTSAECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVL 995
            ..|:   ...:.||:          .:|.   .||..|.:::|::..|:::||.:.:.:||..::
  Fly  2341 EGENIKGVRNADECR----------RIPG---NVWTNRKYNFDDLGKALMSLFVLSSRDGWVNIM 2392

  Fly   996 QHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIITFQEQGEAELQDGEIDKNQ 1060
            ...:.|...|:.||.|:.....:::|.:.::..||.:|:||.:::..|....|.:.::.:|.:..
  Fly  2393 YTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQEKEEKIRRAA 2457

  Fly  1061 KSCIDFTIGARPLE------RYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQ 1119
            |..:......|.:.      .|.|.     :..|..:|.|..|:..|..:|..|.:.:.|:|:..
  Fly  2458 KRALQMEKKRRRMHEPPYYTNYSPT-----RMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKM 2517

  Fly  1120 GDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVLGSIVDALWMEFGSNS- 1183
            ....:.:||..|..||.:|.:|..:|::..|.|.:.||.||..|:..||.|||..:..|..:|: 
  Fly  2518 PSGLKYALKIFNYFFTAVFILEANMKLVALGWKLYLKDRWNQLDVGIVLLSIVGIVLEELETNTH 2582

  Fly  1184 ----IN---VGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1241
                ||   :..:|:.|.||::|||:....||.||.|.:|:...:..:.||..:||||:|.:|::
  Fly  2583 QIIPINPTIIRVMRVLRIARVLKLLKMANGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVE 2647

  Fly  1242 VFGNIK---------LGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKACDDDA 1297
            :||.::         ||       .|.:|.:|....:.|||.|||:.|..||...|:.. |||.|
  Fly  2648 LFGRLECSDEIPCQGLG-------EHAHFANFGMAFLTLFRVATGDNWNGIMKDTLRDN-CDDAA 2704

  Fly  1298 EKAPGEYCGSTLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEY 1362
            :........|.:|..:||.|:....|:::|:.|||:|               .||:|        
  Fly  2705 DCVRNCCVSSVIAPIFFVIFVLMAQFVLVNVVVAVLM---------------KHLEE-------- 2746

  Fly  1363 DPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIREN 1427
                    .:.:|.|.|.                       |.:.|:.|           |:|| 
  Fly  2747 --------SHKQMEDELD-----------------------MEVELERE-----------LVRE- 2768

  Fly  1428 LSIKMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVPPSDQLNKGKLSVGKIYAGFLILESWR 1492
                    :|..| :.:|.:.:       |:.......||........|....||          
  Fly  2769 --------QEFAQ-EQKLCQQL-------AEAQSKAAAPPRPLAKVKSLPKNFIY---------- 2807

  Fly  1493 STRFGQLDSGMPMLELQDASRHPSQESLTGADAGHLHPGHSYMNGHRRSPSLRHNGSPLARSPSP 1557
            ||  ..||...|      |....:..|||.:.|.:|:...:..:|.....::     |......|
  Fly  2808 ST--PSLDKKFP------AVSGVNNPSLTSSAATNLNQVATAGSGGAAPGAV-----PAGSGAGP 2859

  Fly  1558 RRRGHQYIHHDI-----GFSDTVSNVVEMVKETRHPRHGNSHPRYPRGSWSASTSPARSPS---- 1613
            ||:..||.....     |.|     :.|| ..|..|:...:....|.|....:.|..|..|    
  Fly  2860 RRQTVQYFQQPPQSMLGGLS-----LAEM-GGTLTPQALGARLGEPFGGGGGNKSGPRRQSYWQI 2918

  Fly  1614 -PSRYGGHLSR---------------SKRTQLPYPTYGTTSL-CQRSRSPSPARLQEMRERDRLG 1661
             |.|..|.||:               :|||......:|..:| |:|      ..:.|..|.|..|
  Fly  2919 NPIRKRGVLSKERSLDEQAIRRRNLEAKRTSCDSLPWGGDALDCRR------GTIFESLESDGGG 2977

  Fly  1662 Y----------GIDMGVTHVQHSYPTLASRRAGIGRR---------------------LPP---- 1691
            .          |:..||     ||...:.|.|.:|..                     |||    
  Fly  2978 VGGGGSGGGGGGLGGGV-----SYDLRSVRSADVGHSEMDGDVSLSVVSALVPSVTTPLPPPLSL 3037

  Fly  1692 ---TP-SKPSTLQLKPTNINFPKLNASPTHTHHSTPHSVHSLPHHRDLLRDPRDMYYSSRE---R 1749
               || |.|:.||| |..:..|..:..|......:............||..||.|...||.   :
  Fly  3038 PIVTPTSTPTPLQL-PMPMPMPMAHPPPRRPFGWSQSVDQGCLRSNLLLSVPRSMPPRSRSGSTK 3101

  Fly  1750 ERDRERLRDRDRDRDRDRL 1768
            :..:::..|.|.|.|.:.|
  Fly  3102 QLFKQQALDEDADMDENSL 3120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cacNP_001356945.1 Ion_trans 37..324 CDD:334124 110/342 (32%)
Ion_trans 441..677 CDD:334124 91/568 (16%)
Ion_trans 769..1050 CDD:334124 84/284 (30%)
Ion_trans 1094..1345 CDD:334124 84/267 (31%)
GPHH 1346..1416 CDD:339854 9/69 (13%)
Ca_chan_IQ 1418..1492 CDD:337190 12/73 (16%)
Ca-alpha1TNP_001259267.1 Ion_trans 332..636 CDD:278921 99/306 (32%)
Ion_trans 1261..1495 CDD:278921 84/239 (35%)
Ion_trans 2192..2448 CDD:278921 80/268 (30%)
Ion_trans 2510..2728 CDD:278921 73/225 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439102
Domainoid 1 1.000 73 1.000 Domainoid score I3264
eggNOG 1 0.900 - - E1_KOG2301
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 311 1.000 Inparanoid score I473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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