Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017455544.1 | Gene: | Cacna1d / 29716 | RGDID: | 70973 | Length: | 2207 | Species: | Rattus norvegicus |
Alignment Length: | 2323 | Identity: | 893/2323 - (38%) |
---|---|---|---|
Similarity: | 1212/2323 - (52%) | Gaps: | 459/2323 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 KKEENPPGGGPT-SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTV 68
Fly 69 LAQKLEKTEAYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTG-FMTQYPQIGPEV 132
Fly 133 -------------DLRTLRAIRVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFA 184
Fly 185 IIGLEFYSGALHKTCYSLEDPNKLVKEGESETPCNTDNILEKATGSFVCNNTTSMCLEKWEGPNS 249
Fly 250 GITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314
Fly 315 EFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTEEEKMHIMEARRRNAA 379
Fly 380 KRKKLKSLGKSKSTDTEEEEAEEDYGDDGYLKTRSKPQGSCTGFW-------------------- 424
Fly 425 ------RAEKRFRFW-------IRHTVKTQWFYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYA 476
Fly 477 EFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGS-FGLSVLRALRL 540
Fly 541 LRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQFNL-PGGTPETNF 604
Fly 605 NTFPIALLTVFQILTGEDWNEVMYQGIISQGG-AQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVD 668
Fly 669 NLANAQELTAAEEEQVEEDKEKQL---QELEKEMEALQADGVHVENGDGAV--------APSKSK 722
Fly 723 --------GKKKEEEKKEEEEVTEGPKPM-------------LPY-SSMFILSPTNPIRRGAHWV 765
Fly 766 VNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNKILNYFDYAFTGVFTIEMLLKIVDLGVILHP 830
Fly 831 GSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFD 895
Fly 896 CVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYCTDESKHTSAECQGSYFKYEEDEL-LPK 959
Fly 960 QELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYF 1024
Fly 1025 IVFPFFFVNIFVALIIITFQEQGEAELQDGEIDKNQKSCIDFTIGARPLERYMPKNRNTFKYKVW 1089
Fly 1090 RIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNF 1154
Fly 1155 FKDPWNIFDLITVLGSIVDA-----------LWMEFG---------------------------- 1180
Fly 1181 --------SNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAI 1237
Fly 1238 IGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKACDDDAEKAPG 1302
Fly 1303 E--YCGSTLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPN 1365
Fly 1366 ATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSI 1430
Fly 1431 KMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVPPSDQLNKGKLSVGKIYAGFLILESWRSTR 1495
Fly 1496 FGQLDSGMPMLELQDASRHPSQESLTGADAGHLHPGHSYMNGHRRSPS----------------- 1543
Fly 1544 -LRHNGSPLARSPSPRRRGHQYIHHDIGFSDTVSNVVEMVKETRHPRHGNSHPRYPRGSWSASTS 1607
Fly 1608 PARSPSPSRYGGHLSRSKRTQLP-YPTYGTTSLCQRSRSPSPARLQEMRERDRLGYGIDMGVTHV 1671
Fly 1672 QHSYPTLASRRAGIGRRLPPTPSKPSTLQLKPTNINFPKLNASPT---------HTHHSTPHSVH 1727
Fly 1728 SLPHHRDLLRDPRDMYYSSRERERDRER-LRDRDRD-------RDRDRLHEYDLRYEYRD----R 1780
Fly 1781 ERELYERER----DREREVERERLEYI---------------------------APLSFEQALAM 1814
Fly 1815 GRTGRVL-PSPVLNGFKPKSGLNPRHSDSDEEDWCXQRLXLRSRNRKDQIWVXHQAICSSLSAPN 1878
Fly 1879 LDHNFDTIRHSYQIPEHLQNLPYLCPPVHQHQHQHQT----QTQNQRQHQDQHLYQRYGTNVSTP 1939
Fly 1940 KLGTTISDIKLAGVSLQELSPNRQPQSQQKQEQ----------QLHQDGWLR-----WYRQSGPY 1989
Fly 1990 GSPVMASLPETRATSPHSDIEFIRTMKRSE-TGTTAITPR---TTKTEAMILSVPITITSPLAIK 2050
Fly 2051 KIYSDNDINYNTERGTDNDRV--DDAPAHHYHQPELTT--PDLQDEPP 2094 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 162/300 (54%) |
Ion_trans | 441..677 | CDD:334124 | 147/238 (62%) | ||
Ion_trans | 769..1050 | CDD:334124 | 135/281 (48%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 149/299 (50%) | ||
GPHH | 1346..1416 | CDD:339854 | 38/69 (55%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 30/73 (41%) | ||
Cacna1d | XP_017455544.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |