Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062138.1 | Gene: | Scn11a / 29701 | RGDID: | 3630 | Length: | 1765 | Species: | Rattus norvegicus |
Alignment Length: | 1726 | Identity: | 420/1726 - (24%) |
---|---|---|---|
Similarity: | 753/1726 - (43%) | Gaps: | 406/1726 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKT----- 76
Fly 77 -EAYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAI 140
Fly 141 RVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDP 205
Fly 206 NKLVKEGESETPCNTDNILEKA------------TGSFVCNNTTSMCLEKWEGPNSGITSFDNIG 258
Fly 259 FAMLTVFQCITMEGW---------TAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314
Fly 315 EFAKEREKV--ENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTEEEKMHIMEARRRN 377
Fly 378 AAKRKKLKS-------LGKSKSTDTEEEEAEEDYGDDGYLKTRSK-------------------- 415
Fly 416 -------------------------PQG----------SCTGFWRAEKRFRFWIRHTVKTQWFYW 445
Fly 446 FVI-VLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFD 509
Fly 510 CVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLL 574
Fly 575 FLFILIFALLGMQLFGGQFNLPG-GTPET-----NFNTFPIALLTVFQILTGEDWNEVMYQGIIS 633
Fly 634 QGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEEE---------------- 682
Fly 683 ----------------------------------------------------------------- 682
Fly 683 ---QVEEDKE--------------------------KQLQELEK---EMEALQADGVHVENGDGA 715
Fly 716 VAPSKSKG--------------------KKKEEEKKEEEEVTEGPKPMLPYSSMFILSPTNP--- 757
Fly 758 -------IRRGAHWVVNLPYFDFFIMVVISMSSIALAAED---PVRENSRRNKILNYFDYAFTGV 812
Fly 813 FTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLRV 877
Fly 878 LRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC---TDESKH 939
Fly 940 -------TSAECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVLQH 997
Fly 998 SMAATYEDRGPIQNFRIEMSIFYIVYFIVF----PFFFVNIFVALIIITF-QEQGEAELQDGEID 1057
Fly 1058 KNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQG 1120
Fly 1121 DMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVLGSIVDALWMEFGSNSIN 1185
Fly 1186 -----VGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN 1245
Fly 1246 IKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKACDDDAEKAPGEYCGST-- 1308
Fly 1309 -------LAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDS-SILGAHHLDEFVRIWAEYDPN 1365
Fly 1366 ATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSI 1430
Fly 1431 KMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVP 1466 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 87/315 (28%) |
Ion_trans | 441..677 | CDD:334124 | 74/242 (31%) | ||
Ion_trans | 769..1050 | CDD:334124 | 88/298 (30%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 76/265 (29%) | ||
GPHH | 1346..1416 | CDD:339854 | 17/69 (25%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 9/49 (18%) | ||
Scn11a | NP_062138.1 | I. /evidence=ECO:0000305 | 115..403 | 90/323 (28%) | |
Ion_trans | 160..404 | CDD:278921 | 79/265 (30%) | ||
II. /evidence=ECO:0000305 | 554..820 | 81/275 (29%) | |||
Ion_trans | 589..807 | CDD:278921 | 69/223 (31%) | ||
Na_trans_assoc | 812..1029 | CDD:284034 | 24/225 (11%) | ||
III. /evidence=ECO:0000305 | 1022..1319 | 95/330 (29%) | |||
Ion_trans | 1051..1297 | CDD:278921 | 80/279 (29%) | ||
Na_channel_gate | 1289..1341 | CDD:240441 | 11/51 (22%) | ||
IV. /evidence=ECO:0000305 | 1328..1619 | 87/305 (29%) | |||
Ion_trans | 1363..1595 | CDD:278921 | 68/246 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |