Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_058943.2 | Gene: | Scn10a / 29571 | RGDID: | 3629 | Length: | 1956 | Species: | Rattus norvegicus |
Alignment Length: | 1969 | Identity: | 466/1969 - (23%) |
---|---|---|---|
Similarity: | 793/1969 - (40%) | Gaps: | 535/1969 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGGPKKEENPPGGGPTSLFILTEDNPIRKYTRFIIEW-----PPFEYA----------------V 44
Fly 45 LLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFLCIFCVEASLKILALGLVLHKHSYLRNIW 109
Fly 110 NIMDFFVVVTGFMTQYPQIGPEVDLR---TLRAIRVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQ 171
Fly 172 IGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKLVKEGESETPCNTDNILEK---------- 226
Fly 227 ATGSFVCNNTTS--------MCLEKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDA 283
Fly 284 LGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEW 348
Fly 349 ICKAEEVILAEERTTEEEKMHI---MEARRRNAAKRKKLKSLGKSKSTDTEEEEAEEDY------ 404
Fly 405 ----------------------------------------------------------------- 404
Fly 405 -----------GDDGYL------KTRSKPQG---------------------------------- 418
Fly 419 ---------------------------SCTGFWRAEKRFRFWIRHTVKTQWFYWFVIVLVFLNTV 456
Fly 457 CVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVI 521
Fly 522 WSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGM 586
Fly 587 QLFGGQFNL-PGGTPETN-----------FNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQK 639
Fly 640 GMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEEE---------------------- 682
Fly 683 ---------------QVE----------------------------------------------- 685
Fly 686 ----------EDKEKQLQELEKEMEALQADGVHVENGDGA------------------------- 715
Fly 716 --VAPSKSKGKKKEEEKK--------------------EEEEV------------------TEGP 740
Fly 741 KPMLPYSSMFILSPTNP------IRRGAHWVVNLPYFDFFIMVVISMSSIALAAEDP-VRENSRR 798
Fly 799 NKILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAG 863
Fly 864 QNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNG 928
Fly 929 KFFYCTDESK-----------HTSAECQ-----GSYFKYEEDELLPKQELRVWKPRAFHYDNVAA 977
Fly 978 AMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIIT 1042
Fly 1043 FQEQGEAEL--QDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMM 1103
Fly 1104 LIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKN-FFKDPWNIFDLITV 1167
Fly 1168 L--------GSIVDALWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYV 1224
Fly 1225 CLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLK 1289
Fly 1290 --GKACDDDAEKAPGE--YCGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSS-ILG 1348
Fly 1349 AHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELR 1413
Fly 1414 VQFTTTLFALIRENLSIKMRAPEEMD--QADMELRETITNIWPLQAKKMLNLLVPPSDQLNKGKL 1476
Fly 1477 SVGKIYAGFLILESW---------RSTRFG-----------QLDSGMP-MLELQDA-SRHPSQES 1519
Fly 1520 LTG--ADAGHLHPGHSYMN 1536 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 93/328 (28%) |
Ion_trans | 441..677 | CDD:334124 | 82/247 (33%) | ||
Ion_trans | 769..1050 | CDD:334124 | 89/297 (30%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 78/264 (30%) | ||
GPHH | 1346..1416 | CDD:339854 | 19/69 (28%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 15/84 (18%) | ||
Scn10a | NP_058943.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 31..54 | ||
I. /evidence=ECO:0000305 | 116..404 | 91/317 (29%) | |||
Ion_trans | 129..406 | CDD:395416 | 90/306 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 441..484 | 9/43 (21%) | |||
Na_trans_cytopl | <482..614 | CDD:403218 | 6/131 (5%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 537..581 | 4/43 (9%) | |||
II. /evidence=ECO:0000305 | 646..910 | 91/280 (33%) | |||
Ion_trans | 663..893 | CDD:395416 | 81/243 (33%) | ||
Na_trans_assoc | 903..1148 | CDD:399489 | 22/246 (9%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1008..1094 | 10/85 (12%) | |||
III. /evidence=ECO:0000305 | 1141..1450 | 96/331 (29%) | |||
Ion_trans | 1152..1428 | CDD:395416 | 89/298 (30%) | ||
Na_channel_gate | 1420..1472 | CDD:240441 | 11/52 (21%) | ||
IV. /evidence=ECO:0000305 | 1459..1758 | 91/305 (30%) | |||
Ion_trans | 1476..1733 | CDD:395416 | 78/263 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1906..1956 | 11/36 (31%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |