Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936827.1 | Gene: | Scn5a / 25665 | RGDID: | 3637 | Length: | 2020 | Species: | Rattus norvegicus |
Alignment Length: | 2078 | Identity: | 491/2078 - (23%) |
---|---|---|---|
Similarity: | 815/2078 - (39%) | Gaps: | 607/2078 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
Fly 147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYS---------- 201
Fly 202 ---------------LEDP-NKLVKEGESETPCNTDNILEKATGSFVCNNTTS--------MCLE 242
Fly 243 KWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNL 307
Fly 308 VLGVLS--------GEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTE 364
Fly 365 EEKMHIMEARRRNAAKRKKLKS---------LGKSKSTD-------------------------- 394
Fly 395 ------TEEEEAEEDYGDD-------------------------------------GYLKTRSK- 415
Fly 416 ----------------------------------------------------PQGSCT-GF---- 423
Fly 424 -----------------------------W-RAEKRFRFW--------IRHTVKTQWFYWFVI-- 448
Fly 449 --------VLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSF 505
Fly 506 NRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISL 570
Fly 571 LFLLFLFILIFALLGMQLFGGQFNL-------PGGTPETNFNTFPIALLTVFQILTGEDWNEVMY 628
Fly 629 QGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEE------------ 681
Fly 682 ----------------------------------------------------------------- 681
Fly 682 ---------------------------EQVEEDKEKQL---QELEKEMEALQADGVH-------- 708
Fly 709 ----VENGDGAVAPSKSKGKKKEEEKKEEEEVTEGPKPMLPYSSMFILSPTNP------------ 757
Fly 758 -------------IRR------------GAHW---------VVNLPYFDFFIMVVISMSSIALAA 788
Fly 789 EDPVRENSRRNKI-LNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVS 852
Fly 853 FGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFI 917
Fly 918 FSVIGVQLFNGKFFYCTDESK----------HTSAECQ-----GSYFKYEEDELLPKQELRVWKP 967
Fly 968 RAFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVF----P 1028
Fly 1029 FFFVNIFVALIIITFQEQGEAEL--QDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVW 1089
Fly 1090 RIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNF 1154
Fly 1155 FKDPWNIFDLITVLGSIV-----DALWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTF 1214
Fly 1215 VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEA 1279
Fly 1280 WPNIMLACLK--GKACDDDAEKAPGE--YCGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDY 1339
Fly 1340 LTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIR 1403
Fly 1404 MNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVPPS 1468
Fly 1469 DQLNKGKLSVGKIYAGFLILESWRSTRFGQLDSGMPMLELQDA-SRHPSQESLTGADAGHLHPGH 1532
Fly 1533 SYMNGHRRSPSLRHNGSPLARSPSPRRRGHQYIHHDIGFSDTVSNVVEMVKETRHPRHGNSHPRY 1597
Fly 1598 PRGSWSASTSPARSPS-PSRYGGHLSRSKRTQLPYPTYGTTSLCQRSRSPSPARLQEMRERDR 1659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 93/328 (28%) |
Ion_trans | 441..677 | CDD:334124 | 79/252 (31%) | ||
Ion_trans | 769..1050 | CDD:334124 | 94/300 (31%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 76/260 (29%) | ||
GPHH | 1346..1416 | CDD:339854 | 21/69 (30%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 12/73 (16%) | ||
Scn5a | XP_038936827.1 | Ion_trans | 131..424 | CDD:395416 | 90/319 (28%) |
Na_trans_cytopl | 484..668 | CDD:403218 | 17/183 (9%) | ||
Ion_trans | 717..930 | CDD:395416 | 69/221 (31%) | ||
Na_trans_assoc | 956..1203 | CDD:399489 | 27/246 (11%) | ||
Ion_trans | 1207..1482 | CDD:395416 | 94/301 (31%) | ||
Na_channel_gate | 1474..1526 | CDD:240441 | 10/52 (19%) | ||
Ion_trans | 1531..1785 | CDD:395416 | 76/258 (29%) | ||
GPHH | 1797..1844 | CDD:407139 | 17/51 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |