Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038953406.1 | Gene: | Cacna1a / 25398 | RGDID: | 2244 | Length: | 2463 | Species: | Rattus norvegicus |
Alignment Length: | 2501 | Identity: | 1077/2501 - (43%) |
---|---|---|---|
Similarity: | 1332/2501 - (53%) | Gaps: | 680/2501 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
Fly 147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKLVKE 211
Fly 212 GESETPCNTDNILEKATGSFVCNNTTSMCLEKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAI 276
Fly 277 LYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFAKEREKVENRQEFLKLRRQQQLERE 341
Fly 342 LNGYVEWICKAEEVILAEERTTEEEKMHIMEARRRNAAKRKKLKSLGKSKSTDTEEEEAEEDYGD 406
Fly 407 DGYL-------KTRSKPQGSCTGFWRAEKRFRFWIRHTVKTQWFYWFVIVLVFLNTVCVAVEHYG 464
Fly 465 QPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVK-GG 528
Fly 529 SFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQF 593
Fly 594 NLPGGTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTL 658
Fly 659 LNVFLAIAVDNLANAQELTAAEEEQVEEDKEKQLQELEKEM------------------------ 699
Fly 700 ---------------------EALQADGV------------------------------------ 707
Fly 708 ---------------------------------------------------------HV------ 709
Fly 710 ---------------------------------------------------------ENGDG--- 714
Fly 715 ----------------------------------------------------------------- 714
Fly 715 --------------AVAPSKSK---------------------------GK-------------- 724
Fly 725 --------------------------------------------------KKEEEKKEEEEV--- 736
Fly 737 TEGPKPMLPYSSMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNKI 801
Fly 802 LNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMS--GSSAGQ 864
Fly 865 NLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGK 929
Fly 930 FFYCTDESKHTSAECQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQV 994
Fly 995 LQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIITFQEQGEAELQDGEIDKN 1059
Fly 1060 QKSCIDFTIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYE 1124
Fly 1125 KSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVLGSIVDALWMEFG--SNSINVG 1187
Fly 1188 FLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKL-GTV 1251
Fly 1252 ENS------ITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKACDDDAEKAPGEYCGSTLA 1310
Fly 1311 YAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYTEM 1375
Fly 1376 YDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSIKM-RAPEEMD 1439
Fly 1440 QADMELRETITNIWPLQAKKMLNLLVPPSDQLNKGKLSVGKIYAGFLILESWRSTRFGQL----- 1499
Fly 1500 -DSGMPMLELQDASRHPSQE---SLTGADAGHLHPGHSYMNGHRRSPSLRHNGSPLARSPSPRRR 1560
Fly 1561 GHQYIHHDIGFSDTVSNVVEMVKETRHPRHGNSHPRYPRGSWSASTSPARSPSPSRYGGHLSRSK 1625
Fly 1626 RTQLPYPTYGTTSLCQRSRSPSPARLQEMRERDRLGYGIDMGVTHVQHSYPTLASRRAGIGRRLP 1690
Fly 1691 PTPSKPSTLQLKPTNINFPKL-NASPTHTHHSTPHSVHSLPHHRDLLRDPRDMYYSSRERERDRE 1754
Fly 1755 RLRDRDRDRDRDRLHEYDLRYEYRDRERELYERERDR-EREVERERLEYI-APLSFEQALAMGRT 1817
Fly 1818 GRVLPSPVLNGFKPKSGLNPRHSDSDEEDWCXQRLXLRSRNRKDQIWVXHQAICSSLSAPNLDHN 1882
Fly 1883 FDTIRHSYQIPEHLQNLPYLCPPVHQHQHQHQTQTQNQRQHQDQHLYQRYGTNVSTPKLGTTISD 1947
Fly 1948 IKLAGVSLQELSPNRQPQSQQKQEQQLHQDGWLRWYRQSGPYGSPVMASLPETRATS-PHSDIEF 2011
Fly 2012 IRTMKRSETGTTAITPRTTKTEAMILSVPITITSPL----AIKKIYSDNDINYNTERGTDNDRVD 2072
Fly 2073 DAPAHHYHQP-----ELTTPDLQDEPPLQQH 2098 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 190/286 (66%) |
Ion_trans | 441..677 | CDD:334124 | 190/236 (81%) | ||
Ion_trans | 769..1050 | CDD:334124 | 188/282 (67%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 175/259 (68%) | ||
GPHH | 1346..1416 | CDD:339854 | 42/69 (61%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 32/74 (43%) | ||
Cacna1a | XP_038953406.1 | Ion_trans | 188..462 | CDD:395416 | 190/286 (66%) |
Ion_trans | 578..816 | CDD:395416 | 191/237 (81%) | ||
PHA03247 | <879..1260 | CDD:223021 | 29/380 (8%) | ||
Ion_trans | 1284..1564 | CDD:395416 | 188/281 (67%) | ||
Ion_trans | 1609..1868 | CDD:395416 | 175/259 (68%) | ||
GPHH | 1877..1930 | CDD:407139 | 32/52 (62%) | ||
Ca_chan_IQ | 1941..2014 | CDD:400901 | 32/75 (43%) | ||
PHA03307 | 2040..>2444 | CDD:223039 | 112/602 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 389 | 1.000 | Domainoid score | I760 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1808 | 1.000 | Inparanoid score | I58 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000179 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100303 | |
Panther | 1 | 1.100 | - | - | O | PTHR45628 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X841 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.970 |