DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cac and Catsper1

DIOPT Version :9

Sequence 1:NP_001356945.1 Gene:cac / 32158 FlyBaseID:FBgn0263111 Length:2110 Species:Drosophila melanogaster
Sequence 2:NP_647462.1 Gene:Catsper1 / 225865 MGIID:2179947 Length:686 Species:Mus musculus


Alignment Length:358 Identity:87/358 - (24%)
Similarity:161/358 - (44%) Gaps:56/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 GKSKSTDTEEEEAEEDYGDDGYLKTRSKPQGSCTGFWRAEKRFR-------FW--IRHTV----- 438
            ||::|.::..|.|....|:| :::.|.|.|       ||.|:..       .|  |.|.:     
Mouse   286 GKAQSRESLRESASLSEGED-HVQKRKKAQ-------RAHKKAHTGNIFQLLWEKISHLLLGLQQ 342

  Fly   439 ------KTQWFYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYA-EFIFLGLFMSEMFIKMYALG 496
                  ::..|..|:.::|.||||.:..:.:.:.....|:.:.. :.|||.:::.|..:|:.|||
Mouse   343 MILSLTQSLGFETFIFIVVCLNTVILVAQTFTELEIRGEWYFMVLDSIFLSIYVLEAVLKLIALG 407

  Fly   497 PRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFG---------LSV---LRALRLLRIFKVTKY 549
            .. ||...:|..|..::..::.:.:..::...|:.         |.|   :||||.:|:.:....
Mouse   408 LE-YFYDPWNNLDFFIMVMAVLDFVLLQINSLSYSFYNHSLFRILKVFKSMRALRAIRVLRRLSI 471

  Fly   550 WSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQFNLPGGTPETNFNTFPIALLTV 614
            .:||..:..:|..|:.||.::|.|:|..:.:|:::...||      ....|:...|.| ..|.|:
Mouse   472 LTSLHEVAGTLSGSLPSITAILTLMFTCLFLFSVVLRALF------QDSDPKRFQNIF-TTLFTL 529

  Fly   615 FQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDN--LANAQELT 677
            |.:||.:||: ::|....:||......|..||.::..    :..||:.:|:.|||  :|..:.|.
Mouse   530 FTMLTLDDWS-LIYIDNRAQGAWYIIPILMIYIVIQY----FIFLNLVIAVLVDNFQMALLKGLE 589

  Fly   678 AAEEEQVEEDKEKQLQELEKEMEALQADGVHVE 710
            ..:.||.....||.|.:...::....|:....|
Mouse   590 KVKLEQAARVHEKLLDDSLTDLNKADANAQMTE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cacNP_001356945.1 Ion_trans 37..324 CDD:334124
Ion_trans 441..677 CDD:334124 63/250 (25%)
Ion_trans 769..1050 CDD:334124
Ion_trans 1094..1345 CDD:334124
GPHH 1346..1416 CDD:339854
Ca_chan_IQ 1418..1492 CDD:337190
Catsper1NP_647462.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..177
MPLKIP 99..>201 CDD:292140
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..318 10/36 (28%)
Ion_trans 386..581 CDD:278921 54/207 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.