Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001277603.1 | Gene: | Scn9a / 20274 | MGIID: | 107636 | Length: | 1984 | Species: | Mus musculus |
Alignment Length: | 1906 | Identity: | 472/1906 - (24%) |
---|---|---|---|
Similarity: | 822/1906 - (43%) | Gaps: | 449/1906 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
Fly 147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCY--SLEDPNKL- 208
Fly 209 --VKEGESETPCNT-DNILEKATGSFVCNNTT--SMCLEKWE------GPNSGITSFDNIGFAML 262
Fly 263 TVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG----------EFA 317
Fly 318 KEREKVENRQEFLKLRR-QQQLERELNGYVEWICKAEEVILA-EERTTEEEKMHIMEAR-RRNAA 379
Fly 380 KRKKLK-SLGKSKSTD------------------------------------------------- 394
Fly 395 -------------------TEEEEAEED---YGD------------------------------- 406
Fly 407 ----------------------------------------------------------------- 406
Fly 407 -----DGYLKTRSKPQGS---------------CTGFW-RAEKRFRFW--IRHTVKTQWFYWFVI 448
Fly 449 ----------VLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFES 503
Fly 504 SFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSII 568
Fly 569 SLLFLLFLFILIFALLGMQLFGGQF-------NLPGGTPETNFNTFPIALLTVFQILTGEDWNEV 626
Fly 627 MYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAV-----DNLANAQELTAAEEEQV-- 684
Fly 685 --------------------------------------------------------------EED 687
Fly 688 K--------------EKQLQEL---------------EKEMEALQADGVHVENGDGAVAPSKSKG 723
Fly 724 KKKE----------EEKKEEEEV---------TEGPKPMLPYSSMFILSPTN----PIRRGAHWV 765
Fly 766 VNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNK-ILNYFDYAFTGVFTIEMLLKIVDLGVILH 829
Fly 830 PGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVF 894
Fly 895 DCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC---TDESKHTSAECQGSYFKYEEDEL 956
Fly 957 LPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYI 1021
Fly 1022 VYFIVFPFFFVNIFVALIIITFQEQGEAEL--QDGEIDKNQKSCIDF--TIGARPLERYMPKNRN 1082
Fly 1083 TFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKII 1147
Fly 1148 GFGVKNFFKDPWNIFDLITVLGSIVDALWME-----FGSNSINVGFLRLFRAARLIKLLRQGYTI 1207
Fly 1208 RILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLF 1272
Fly 1273 RCATGEAWPNIMLACLKGKACDDDAEKA-PGEY----CGS-TLAYAYFVSFIFFCSFLMLNLFVA 1331
Fly 1332 VIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNR 1395
Fly 1396 LAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMDQADMELRETITNIWPLQAKKM 1460
Fly 1461 LNLLVPPSDQLNKGKLSVGKIYAGFLILESWRSTRFGQLDSGMPMLELQDASRH---PSQESL-- 1520
Fly 1521 -----------TGADAGHLHP 1530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 94/310 (30%) |
Ion_trans | 441..677 | CDD:334124 | 83/257 (32%) | ||
Ion_trans | 769..1050 | CDD:334124 | 92/284 (32%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 84/261 (32%) | ||
GPHH | 1346..1416 | CDD:339854 | 20/69 (29%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 13/73 (18%) | ||
Scn9a | NP_001277603.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 26..55 | ||
I. /evidence=ECO:0000305 | 112..410 | 93/310 (30%) | |||
Ion_trans | 147..410 | CDD:278921 | 85/274 (31%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 458..540 | 14/81 (17%) | |||
Na_trans_cytopl | 487..606 | CDD:288761 | 9/118 (8%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 574..609 | 2/34 (6%) | |||
II. /evidence=ECO:0000305 | 725..988 | 86/271 (32%) | |||
Ion_trans | 760..955 | CDD:278921 | 67/203 (33%) | ||
Na_trans_assoc | 981..1185 | CDD:284034 | 22/203 (11%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1015..1039 | 0/23 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1089..1145 | 7/55 (13%) | |||
III. /evidence=ECO:0000305 | 1178..1486 | 100/318 (31%) | |||
Ion_trans | 1224..1464 | CDD:278921 | 78/250 (31%) | ||
Na_channel_gate | 1456..1508 | CDD:240441 | 11/52 (21%) | ||
IV. /evidence=ECO:0000305 | 1495..1793 | 95/302 (31%) | |||
Ion_trans | 1530..1768 | CDD:278921 | 78/242 (32%) | ||
GPHH | 1780..1835 | CDD:293510 | 19/59 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1933..1984 | 4/21 (19%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |