Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006512056.1 | Gene: | Scn5a / 20271 | MGIID: | 98251 | Length: | 2085 | Species: | Mus musculus |
Alignment Length: | 1865 | Identity: | 448/1865 - (24%) |
---|---|---|---|
Similarity: | 757/1865 - (40%) | Gaps: | 528/1865 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
Fly 147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYS---------- 201
Fly 202 ---------------LEDP-NKLVKEGESETPCNTDNILEKATGSFVCNNTTS--------MCLE 242
Fly 243 KWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNL 307
Fly 308 VLGVLS--------GEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTE 364
Fly 365 EEKMHIMEARRRNAAKRKKLKS---------LGKSKSTD-------------------------- 394
Fly 395 ------TEEEEAEEDYGDD-------------------------------------GYLKTRSK- 415
Fly 416 ----------------------------------------------------PQGSCT-GF---- 423
Fly 424 -----------------------------W-RAEKRFRFW--------IRHTVKTQWFYWFVI-- 448
Fly 449 --------VLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSF 505
Fly 506 NRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISL 570
Fly 571 LFLLFLFILIFALLGMQLFGGQFNL-------PGGTPETNFNTFPIALLTVFQILTGEDWNEVMY 628
Fly 629 QGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEE------------ 681
Fly 682 ----------------------------------------------------------------- 681
Fly 682 ---------------------------EQVEEDKEKQL----QELEKEMEALQADGVH------- 708
Fly 709 -----VENGDGAVAPSKSKGKKKEEEKKEEEEVTEGPKPMLPYSSMFILSPTNP----------- 757
Fly 758 --------------IRR------------GAHW---------VVNLPYFDFFIMVVISMSSIALA 787
Fly 788 AEDPVRENSRRNKI-LNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAV 851
Fly 852 SFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQF 916
Fly 917 IFSVIGVQLFNGKFFYCTDESK----------HTSAECQ-----GSYFKYEEDELLPKQELRVWK 966
Fly 967 PRAFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVF---- 1027
Fly 1028 PFFFVNIFVALIIITFQEQGEAEL--QDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKV 1088
Fly 1089 WRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKN 1153
Fly 1154 FFKDPWNIFDLITVLGSIV-----DALWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWT 1213
Fly 1214 FVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGE 1278
Fly 1279 AWPNIMLACLK--GKACDDDAEKAPGE--YCGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFD 1338
Fly 1339 YLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLI 1402
Fly 1403 RMNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMDQADMELRE 1447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 93/328 (28%) |
Ion_trans | 441..677 | CDD:334124 | 79/252 (31%) | ||
Ion_trans | 769..1050 | CDD:334124 | 94/300 (31%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 76/260 (29%) | ||
GPHH | 1346..1416 | CDD:339854 | 21/69 (30%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 8/30 (27%) | ||
Scn5a | XP_006512056.1 | Ion_trans | 195..488 | CDD:366146 | 90/319 (28%) |
Na_trans_cytopl | 550..732 | CDD:371806 | 15/181 (8%) | ||
Ion_trans | 781..994 | CDD:366146 | 69/221 (31%) | ||
Na_trans_assoc | 1020..1268 | CDD:368948 | 25/247 (10%) | ||
Ion_trans | 1272..1547 | CDD:366146 | 94/301 (31%) | ||
Na_channel_gate | 1539..1591 | CDD:240441 | 10/52 (19%) | ||
Ion_trans | 1596..1850 | CDD:366146 | 76/258 (29%) | ||
GPHH | 1862..1909 | CDD:374878 | 17/51 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |