Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001342095.1 | Gene: | Scn3a / 20269 | MGIID: | 98249 | Length: | 1996 | Species: | Mus musculus |
Alignment Length: | 1965 | Identity: | 487/1965 - (24%) |
---|---|---|---|
Similarity: | 819/1965 - (41%) | Gaps: | 548/1965 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 TSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYF 80
Fly 81 LCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRP 145
Fly 146 LKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKLVK 210
Fly 211 EGESETPCNTDNILE---KATGSFV------------------------------CNNTTS---- 238
Fly 239 ----MCLEKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVI 299
Fly 300 GSFFMLNLVLGVLSGEFAK---------EREKVENRQEFLKLRRQQQ----------LERELNGY 345
Fly 346 VEWICKAEEVILAEERTTEEEKMHIMEARR-RNAAKRKKLKS------------LGKSKSTDT-- 395
Fly 396 ---------------------------------------------------EEEEAEEDYGDDGY 409
Fly 410 ---------------------------------------LKTRSK-------------------- 415
Fly 416 --------PQGSCT-----------------------GFWRA---------------EKR----- 429
Fly 430 --FRF------------W--IRHTVKTQWFYWFV----IVLVFLNTVCVAVEHYGQPSFLTEFLY 474
Fly 475 YAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALR 539
Fly 540 LLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQF-------NLPG 597
Fly 598 GTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVF 662
Fly 663 LAIAV-----DNLA---------NAQELTAAEEEQVEEDKEK----------------------- 690
Fly 691 ---------QLQELEKEMEALQADGVHVENGDG------------------------------AV 716
Fly 717 ---------------------------APSKSKGK---------------KKEEEKKEEEEVTEG 739
Fly 740 PKPMLPYSSMFILSPTNPI----RRGAHWVVNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNK 800
Fly 801 -ILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQ 864
Fly 865 NLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGK 929
Fly 930 FFYCTDESKHTSAECQGSYF------KYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTG 988
Fly 989 EGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFVALIIITFQEQ-----GE 1048
Fly 1049 AELQDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLL 1111
Fly 1112 LMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPWNIFDLITVLGSIVDALW 1176
Fly 1177 ME-----FGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA 1236
Fly 1237 IIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGKA--CDDDAEK 1299
Fly 1300 APGEY----CGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRI 1358
Fly 1359 WAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFAL 1423
Fly 1424 IR---------ENLSIKM----------------------RAPEEMDQADME-------LRETIT 1450
Fly 1451 NIWPLQAKKML--NLLVPPSDQLNKGKLSVGKIYAGFLILESWRSTRFGQLDSGMPMLELQDASR 1513
Fly 1514 H----PSQESLTGAD 1524 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 92/336 (27%) |
Ion_trans | 441..677 | CDD:334124 | 86/260 (33%) | ||
Ion_trans | 769..1050 | CDD:334124 | 94/292 (32%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 82/262 (31%) | ||
GPHH | 1346..1416 | CDD:339854 | 20/69 (29%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 18/113 (16%) | ||
Scn3a | NP_001342095.1 | Ion_trans | 127..434 | CDD:306908 | 91/326 (28%) |
Na_trans_cytopl | 510..697 | CDD:314757 | 13/186 (7%) | ||
Ion_trans | 759..972 | CDD:306908 | 73/221 (33%) | ||
Na_trans_assoc | 998..1201 | CDD:310839 | 28/203 (14%) | ||
Ion_trans | 1206..1478 | CDD:306908 | 93/287 (32%) | ||
Na_channel_gate | 1470..1522 | CDD:240441 | 12/55 (22%) | ||
Ion_trans | 1526..1782 | CDD:306908 | 82/261 (31%) | ||
GPHH | 1786..1849 | CDD:318993 | 20/67 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |