Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001192250.1 | Gene: | Scn10a / 20264 | MGIID: | 108029 | Length: | 1958 | Species: | Mus musculus |
Alignment Length: | 1822 | Identity: | 446/1822 - (24%) |
---|---|---|---|
Similarity: | 744/1822 - (40%) | Gaps: | 481/1822 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
Fly 82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLR---TLRAIRVL 143
Fly 144 RPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKL 208
Fly 209 VKEGESETPCNTDNILEKATGS----------FVCNNTTS--------MCLEKWEGPNSGITSFD 255
Fly 256 NIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFAKER 320
Fly 321 EKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTEEEKMHI-MEARRRNAAKRK-K 383
Fly 384 LKSLGKSKSTDTEEEEAEEDYG--------------------------------------DDGYL 410
Fly 411 K-----------------------------------------TRSKPQGS-CTGF---------- 423
Fly 424 -------------WRAE-------------------------------------------KRFRF 432
Fly 433 WIRHTVKTQWFYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGP 497
Fly 498 RIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVISLLN 562
Fly 563 SMRSIISLLFLLFLFILIFALLGMQLFGGQFNL-PGGTPETN-----------FNTFPIALLTVF 615
Fly 616 QILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAE 680
Fly 681 EE-------------------------------------QVE----------------------- 685
Fly 686 ----------------------------------EDKEKQLQELEKEMEALQADGVHVENGDGA- 715
Fly 716 --------------------------VAP----------------------SKSKGKKKEEEKKE 732
Fly 733 E---------EEVTEGPKPMLP------------YSSMFILSPTNPIRRGAHWVVNLPYFDFFIM 776
Fly 777 VVISMSSIALAAEDP-VRENSRRNKILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNI 840
Fly 841 MDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVV 905
Fly 906 NILIVYILFQFIFSVIGVQLFNGKFFYCTDESKH-----------TSAEC-----QGSYFKYEED 954
Fly 955 ELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIF 1019
Fly 1020 YIVYFIVF----PFFFVNIFVALIIITF-QEQGEAELQDGEIDKNQKSCIDF--TIGARPLERYM 1077
Fly 1078 PKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVET 1142
Fly 1143 VLKIIGFGVKN-FFKDPWNIFDLITVL--------GSIVDALWMEFGSNSINVGFLRLFRAARLI 1198
Fly 1199 KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQS 1263
Fly 1264 FIQGVMLLFRCATGEAWPNIMLACLK--GKACDDDAEKAPGE--YCGS-TLAYAYFVSFIFFCSF 1323
Fly 1324 LMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLG 1387
Fly 1388 FGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMD--QADMELRETIT 1450
Fly 1451 NI 1452 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 90/307 (29%) |
Ion_trans | 441..677 | CDD:334124 | 81/247 (33%) | ||
Ion_trans | 769..1050 | CDD:334124 | 93/302 (31%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 78/264 (30%) | ||
GPHH | 1346..1416 | CDD:339854 | 19/69 (28%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 10/37 (27%) | ||
Scn10a | NP_001192250.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 27..54 | ||
I. /evidence=ECO:0000305 | 116..404 | 93/317 (29%) | |||
Ion_trans | 147..406 | CDD:278921 | 84/288 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 444..483 | 10/38 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 539..583 | 5/43 (12%) | |||
II. /evidence=ECO:0000305 | 646..910 | 88/277 (32%) | |||
Ion_trans | 681..893 | CDD:278921 | 77/225 (34%) | ||
Na_trans_assoc | 903..1148 | CDD:284034 | 25/245 (10%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1006..1094 | 12/87 (14%) | |||
III. /evidence=ECO:0000305 | 1141..1450 | 99/334 (30%) | |||
Ion_trans | 1170..1428 | CDD:278921 | 86/283 (30%) | ||
Na_channel_gate | 1420..1472 | CDD:240441 | 10/51 (20%) | ||
IV. /evidence=ECO:0000305 | 1459..1758 | 91/305 (30%) | |||
Ion_trans | 1494..1733 | CDD:278921 | 72/245 (29%) | ||
GPHH | 1743..1800 | CDD:293510 | 18/61 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1901..1958 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D172471at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |