DRSC/TRiP Functional Genomics Resources

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Protein Alignment cac and SCN11A

DIOPT Version :9

Sequence 1:NP_001356945.1 Gene:cac / 32158 FlyBaseID:FBgn0263111 Length:2110 Species:Drosophila melanogaster
Sequence 2:XP_016861136.1 Gene:SCN11A / 11280 HGNCID:10583 Length:1916 Species:Homo sapiens


Alignment Length:1783 Identity:444/1783 - (24%)
Similarity:792/1783 - (44%) Gaps:371/1783 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYFL 81
            :|||....|.||.....:.....|...::.|:|.|||.:|     .|..|...:...:..|..|.
Human   233 ALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMA-----TGPAKNSNSNNTDIAECVFT 292

  Fly    82 CIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRPL 146
            .|:..||.:||||.|.:|.:.|:||:.||.:|..|:....::..|  |..:.|..||..||.|.|
Human   293 GIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVSYIP--GITIKLLPLRTFRVFRAL 355

  Fly   147 KLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLEDPNKLVKE 211
            |.:|.:..|:|::.::::::..|:.:.:|..|.:.|||::|.:.:.|:|:..|.|.:..|  :..
Human   356 KAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLNLKCISRDCKN--ISN 418

  Fly   212 GESETPC--NTDNILE-KATGSFVCNNTTSM---CLEKWEGPNSGITSFDNIGFAMLTVFQCITM 270
            .|:...|  ..:|..| |..|.::.|:..|:   |......|:...|:|||.|::.|.:|:.:|.
Human   419 PEAYDHCFEKKENSPEFKMCGIWMGNSACSIQYECKHTKINPDYNYTNFDNFGWSFLAMFRLMTQ 483

  Fly   271 EGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFAKERE----KVENRQEFLK 331
            :.|..:...|....| .::..:|:.:|.:|||:::||.|.|::..:.::.:    ::|.:::..:
Human   484 DSWEKLYQQTLRTTG-LYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKMFQ 547

  Fly   332 LRRQQQLERELNGYVEWICKAEEVILAEERT--TEEEKMHIMEARRRNAAKRKK----LKSLGKS 390
             ..||.|:.|         |...|.:..:|:  |..|..:....:|:....:|:    |:..||.
Human   548 -EAQQLLKEE---------KEALVAMGIDRSSLTSLETSYFTPKKRKLFGNKKRKSFFLRESGKD 602

  Fly   391 K--STDTEEE--------------------EAEEDYGDDGY--------------LKTRSKPQ-- 417
            :  .:|::|:                    :..:::||...              :|.:.|.|  
Human   603 QPPGSDSDEDCQKKPQLLEQTKRLSQNLSLDHFDEHGDPLQRQRALSAVSILTITMKEQEKSQEP 667

  Fly   418 --------------GSCTGFWRAEKRFRFWIRHTVKTQWFYWFVI-VLVFLNTVCVAVEHYGQPS 467
                          .:|...|...|:    :..||.|..|....| :.:.:|||.:|:||:...:
Human   668 CLPCGENLASKYLVWNCCPQWLCVKK----VLRTVMTDPFTELAITICIIINTVFLAMEHHKMEA 728

  Fly   468 FLTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGL 532
            ...:.|.....:|..:|::||.:|:.||.|..||...:|.||.:|...|..:|:...::..|:  
Human   729 SFEKMLNIGNLVFTSIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSW-- 791

  Fly   533 SVLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQFNL-- 595
            ..||:.|:||:||:.|.|.:|..|:..:.||:.::.||..:|.:.|.||:::||||||..||.  
Human   792 PFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQLFGRSFNSQK 856

  Fly   596 ------PGGTPET-----NFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIV 649
                  |.|...:     :...|..:.|.||:||.|| |.|.|:: .:.:..|...:.. |.||:
Human   857 SPKLCNPTGPTVSCLRHWHMGDFWHSFLVVFRILCGE-WIENMWE-CMQEANASSSLCV-IVFIL 918

  Fly   650 LVLFGNYTLLNVFLAIAVDNLANAQE--------------------------------------- 675
            :.:.|...:||:|:|:.:::.:|.:.                                       
Human   919 ITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRFRRAFCFVRHTLEHFCHKWC 983

  Fly   676 -----------------------------------------LT------------------AAEE 681
                                                     ||                  |.||
Human   984 RKQNLPQQKEVAGGCAAQSKDIIPLVMEMKRGSETQEELGILTSVPKTLGVRHDWTWLAPLAEEE 1048

  Fly   682 EQVE---EDKEKQLQELEKEMEALQADGVHVENGDGAVAPSKSKGKKKEEEKKEEEE---VTEGP 740
            :.||   ||..:::.:.|.|.:|.:   :|.||    ..|:..:.:..|.:...|:|   ..:.|
Human  1049 DDVEFSGEDNAQRITQPEPEQQAYE---LHQEN----KKPTSQRVQSVEIDMFSEDEPHLTIQDP 1106

  Fly   741 KPMLPYSSMFILSPTNPI------------------------------------RRGAHWVV--N 767
            :.....:|  |||..:.|                                    :|...||:  |
Human  1107 RKKSDVTS--ILSECSTIDLQDGFGWLPEMVPKKQPERCLPKGFGCCFPCCSVDKRKPPWVIWWN 1169

  Fly   768 L----------PYFDFFIMVVISMSSIALAAEDPVRENSRR-NKILNYFDYAFTGVFTIEMLLKI 821
            |          .:|:.||:.||.:||.||..||...||..: .::||..|..||.:|.:||:||.
Human  1170 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILEMVLKW 1234

  Fly   822 VDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKR 886
            |..|.    |.|....|..:|.::||.:..:.          .||..:||.|.||.||||:.:.:
Human  1235 VAFGF----GKYFTSAWCCLDFIIVIVSVTTL----------INLMELKSFRTLRALRPLRALSQ 1285

  Fly   887 VPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYC---TDESKH-----TSAE 943
            ...:|.|.:.::.::..::|:|:|.::|..:|.::||..|:|||..|   ||...:     ..::
Human  1286 FEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGKFGKCINGTDSVINYTIITNKSQ 1350

  Fly   944 CQGSYFKYEEDELLPKQELRVWKPRAFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGP 1008
            |:...|.              |..:..::|||..|.|.|..|.|.:||..::..::.:|.:::.|
Human  1351 CESGNFS--------------WINQKVNFDNVGNAYLALLQVATFKGWMDIIYAAVDSTEKEQQP 1401

  Fly  1009 IQNFRIEMSIFYIVYFIVF----PFFFVNIFVALIIITF-QEQGEAELQDGEIDKNQKSCIDF-- 1066
                ..|.:....:||:||    .||.:|:|:.:||..| |:|.:...||..:.:.||...:.  
Human  1402 ----EFESNSLGYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYNAMK 1462

  Fly  1067 TIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYIN 1131
            .:|::..::.:|:..|..:..|:.||.|..|:..|:.||:.|.:.:|.:.:||....:..|.::|
Human  1463 KLGSKKPQKPIPRPLNKCQGLVFDIVTSQIFDIIIISLIILNMISMMAESYNQPKAMKSILDHLN 1527

  Fly  1132 MGFTGMFSVETVLKIIGFGVKN-FFKDPWNIFDLITVLGSIVDALWMEFGSNSINVGF------- 1188
            ..|..:|::|.::||  |.::. :|.:.||:||.:.||.|||..: :....|..::.|       
Human  1528 WVFVVIFTLECLIKI--FALRQYYFTNGWNLFDCVVVLLSIVSTM-ISTLENQEHIPFPPTLFRI 1589

  Fly  1189 LRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVEN 1253
            :||.|..|:::|:|....||.||:..:.|..:|..:.||:.::.|||||:||..|..:   ..|:
Human  1590 VRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAILGMNWFSKV---NPES 1651

  Fly  1254 SITRHNNFQSFIQGVMLLFRCATGEAWPNIMLACLKGK-ACDDDAEKA--PGEYCGSTLAYAYFV 1315
            .|....||::|...::.||:.:|...|.:::...|:.| :|:..:|..  ||      :|.:|||
Human  1652 GIDDIFNFKTFASSMLCLFQISTSAGWDSLLSPMLRSKESCNSSSENCHLPG------IATSYFV 1710

  Fly  1316 SFIFFCSFLMLNLFVAVIMDNFDYLTRDS-SILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDML 1379
            |:|.....:::|:::|||::||:..|.:| ..||....|.|..:|.::||.||..|.|:.:.|..
Human  1711 SYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFDIFYEVWEKFDPEATQFIKYSALSDFA 1775

  Fly  1380 KNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMDQADME 1444
            ..:..||....  ||:  |:.|: |::|:..|.|:.....|||.....|.    ..:.:|.....
Human  1776 DALPEPLRVAK--PNK--YQFLV-MDLPMVSEDRLHCMDILFAFTARVLG----GSDGLDSMKAM 1831

  Fly  1445 LRETITNIWPLQAKKMLNLLVPPS--DQLNKGKLSVGKIYAGFLILESWRSTRFGQLDSGMPMLE 1507
            :.|......||  ||:...:|..:  .:..:|...:.|.:..:::    :.|:..|.|..    :
Human  1832 MEEKFMEANPL--KKLYEPIVTTTKRKEEERGAAIIQKAFRKYMM----KVTKGDQGDQN----D 1886

  Fly  1508 LQDASRHPSQE------SLTGADAGHLH 1529
            |::....|.|.      |..|...|.:|
Human  1887 LENGPHSPLQTLCNGDLSSFGVAKGKVH 1914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cacNP_001356945.1 Ion_trans 37..324 CDD:334124 82/296 (28%)
Ion_trans 441..677 CDD:334124 76/329 (23%)
Ion_trans 769..1050 CDD:334124 87/294 (30%)
Ion_trans 1094..1345 CDD:334124 80/262 (31%)
GPHH 1346..1416 CDD:339854 22/69 (32%)
Ca_chan_IQ 1418..1492 CDD:337190 13/75 (17%)
SCN11AXP_016861136.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172471at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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