DRSC/TRiP Functional Genomics Resources

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Protein Alignment cac and tpcn1

DIOPT Version :9

Sequence 1:NP_001356945.1 Gene:cac / 32158 FlyBaseID:FBgn0263111 Length:2110 Species:Drosophila melanogaster
Sequence 2:XP_012825344.2 Gene:tpcn1 / 100497529 XenbaseID:XB-GENE-984919 Length:798 Species:Xenopus tropicalis


Alignment Length:786 Identity:160/786 - (20%)
Similarity:316/786 - (40%) Gaps:222/786 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VEASLKILALGLVL-----------------HKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVD 133
            |.|:|::|||.||:                 |:.:.|::...::.|...:...:.|...:     
 Frog   131 VHATLELLALALVVFELAMKMRWLGGKTFLRHRRTMLKSAVLVVQFIEAIVVLVRQTSHV----- 190

  Fly   134 LRTLRAIRVLRPLKLVS----GIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGA 194
                |..|.|||:.||.    |  :::..|:.|.:::.|.:.|.||:||.:|||||:|...:|  
 Frog   191 ----RVTRALRPIFLVDCRYCG--AVRRNLRQIFQSLPPFIDILLLLLFFMVIFAILGFYLFS-- 247

  Fly   195 LHKTCYSLEDPNKLVKEGESETPCNTDNILEKATGSFVCNNTTSMCLEKWEGPNSGITSFDNIGF 259
                    .|||.                                            ..|..:..
 Frog   248 --------SDPND--------------------------------------------PYFSTLEN 260

  Fly   260 AMLTVFQCITMEGWTAILYWTNDALGSAFN---W--IYFVPLIVIGSFFMLNLVLGVLSGEFAK- 318
            :::::|..:|...:.       |.:..|::   |  |:|:..:.|..:|::||:|.|:...|.. 
 Frog   261 SLVSLFVLLTTANFP-------DVMMPAYSRNPWSCIFFIIYLSIELYFIMNLLLAVVFDTFNDI 318

  Fly   319 EREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEERTTEEEKMH---IMEARRRNAAK 380
            |::|.::    |.|.::..::.           :.:::.:.:.|:.....|   :|:..:.:.:.
 Frog   319 EKKKFKS----LLLHKRSAIQH-----------SYQLLHSTQGTSGVSFRHFNGMMKFYKPSMSA 368

  Fly   381 RKKLKSLGKSKSTDTEEEEAEEDYGDDGYLKTRSKPQGSCTGFWRAEKRFRFW------------ 433
            |.:..:....|.:..|....::.|.....::.:          |:.:|....|            
 Frog   369 RDRYLTYRALKQSQAENLRLKDFYHFYEVVELK----------WKVQKIREHWFDDLPPTALLIF 423

  Fly   434 --IRHTVKTQWFYWFVIVLVFLNTVCVAVEHY----GQPSFLTEFLYYAEFIFLGLFMSEMFIKM 492
              :.....::.|.:.:..:|.:|...:..|.:    |  ::..|.:.::..:||.::.||:.:|:
 Frog   424 KGVNVLANSRVFQYIMYAVVAINGFWILAETFMLQGG--NYFPEGVPWSYIVFLTIYGSELLLKL 486

  Fly   493 YALGPRIYFESSFNRFDCVV----ISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSL 553
            ..|||..||.|.:|.|||.|    :.|.:  |:...:|...| :.|||.|:|||:||:.|.:.::
 Frog   487 TGLGPVEYFTSGWNFFDCSVTLLALLGLL--VLAFNMKPFYF-IVVLRPLQLLRLFKMKKRYRTV 548

  Fly   554 RNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGG--------------------------- 591
            .:.:..||..|.| :.|..|:|.:  .|:::||:.|.|                           
 Frog   549 LDTMFELLPRMAS-LGLTLLIFYY--SFSIVGMEFFSGVLYPNCCNTSTVADSYRWLNRTVGNQT 610

  Fly   592 QFNLPGGTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNY 656
            ||. .|.....|||....:.:|:|::....:|..:| :|:.||......:.:.:::||.::    
 Frog   611 QFE-EGYYYLNNFNNILNSFVTLFELTVVNNWYIIM-EGVTSQTSHWARLYFMVFYIVTMV---- 669

  Fly   657 TLLNVFLAIAVDN----LANAQELTAAEEE-----QVEEDKEK--------QLQELEKEMEALQA 704
             :|.:.:|..:|:    :...::...||:|     ::|..||:        |..:...:|..|.:
 Frog   670 -VLTIIVACILDSFVFRMNYCRKNRDAEDEKGITLEMEVGKEELTLILRHTQSSDERSQMRKLLS 733

  Fly   705 DGVHVENGDGAVAPS------KSKGKKKEEEKKEEEEVTEGPK--PMLPYSSMFILSPTNPIRRG 761
               |:::.:   :||      :|:.|.....|..|||:.|..|  ..|.......|.||:...|.
 Frog   734 ---HLQSNE---SPSILFLGRRSRTKSDLSRKMYEEEIQEWYKEHSQLQVKKTVELQPTSGSLRP 792

  Fly   762 AHWVVN 767
            ....||
 Frog   793 RSRTVN 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cacNP_001356945.1 Ion_trans 37..324 CDD:334124 55/264 (21%)
Ion_trans 441..677 CDD:334124 66/274 (24%)
Ion_trans 769..1050 CDD:334124
Ion_trans 1094..1345 CDD:334124
GPHH 1346..1416 CDD:339854
Ca_chan_IQ 1418..1492 CDD:337190
tpcn1XP_012825344.2 Ion_trans 144..322 CDD:395416 46/249 (18%)
Ion_trans 432..683 CDD:395416 66/265 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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