Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826731.2 | Gene: | scn1a / 100488621 | XenbaseID: | XB-GENE-978019 | Length: | 2020 | Species: | Xenopus tropicalis |
Alignment Length: | 1866 | Identity: | 476/1866 - (25%) |
---|---|---|---|
Similarity: | 782/1866 - (41%) | Gaps: | 509/1866 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 TSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYF 80
Fly 81 LCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRP 145
Fly 146 LKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTC----------- 199
Fly 200 ----------YSLEDP-----NKLVKEGESETPCNTDNILEKATGSFVCNNTTS--------MCL 241
Fly 242 EKWEGPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLN 306
Fly 307 LVLGVLSGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILA------------- 358
Fly 359 --------EERTTEEEKMHIMEAR-RRNAAKRKKLKSLG------------KSKSTDT------- 395
Fly 396 ----------------------------------------------EEEEAEEDYGDD------- 407
Fly 408 -----GYL---------------------KTRS-------------------------------- 414
Fly 415 -------------------------KPQGSC-----------TGFWRA---------------EK 428
Fly 429 R-------------FRFW--------IRHTVKTQWFYWFV----IVLVFLNTVCVAVEHYGQPSF 468
Fly 469 LTEFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLS 533
Fly 534 VLRALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQF----- 593
Fly 594 ----NLPGGTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFG 654
Fly 655 NYTLLNVFLAIAVDNLANAQELTAAEEEQ----------------------VEE----------- 686
Fly 687 --DKEKQLQELEKEMEALQADGVHVE--------NGDG--------------------------- 714
Fly 715 --------AVAPSKSKGKKKE--------EEKKEEEEVT-----------------EGPKPMLPY 746
Fly 747 SSMFILSPTN----------PI-------RRGAHW---------VVNLPYFDFFIMVVISMSSIA 785
Fly 786 LAAEDPVRENSRRNK-ILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICA 849
Fly 850 AVSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILF 914
Fly 915 QFIFSVIGVQLFNGKFFYCT---------DESKHTSAECQGSYFKYEEDELLPKQELRVWKPRAF 970
Fly 971 HYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVF----PFFF 1031
Fly 1032 VNIFVALIIITFQEQ-----GEAELQDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVW 1089
Fly 1090 RIVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNF 1154
Fly 1155 FKDPWNIFDLITVLGSIV-----DALWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTF 1214
Fly 1215 VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEA 1279
Fly 1280 WPNIMLACLKGKA--CDDDAEKAPGEY----CGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNF 1337
Fly 1338 DYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKL 1401
Fly 1402 IRMNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMDQADMELRE 1447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 91/320 (28%) |
Ion_trans | 441..677 | CDD:334124 | 81/248 (33%) | ||
Ion_trans | 769..1050 | CDD:334124 | 95/299 (32%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 84/262 (32%) | ||
GPHH | 1346..1416 | CDD:339854 | 22/69 (32%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 8/30 (27%) | ||
scn1a | XP_012826731.2 | Ion_trans | 128..435 | CDD:395416 | 91/319 (29%) |
Na_trans_cytopl | 515..723 | CDD:403218 | 17/207 (8%) | ||
Ion_trans | 772..985 | CDD:395416 | 74/223 (33%) | ||
Na_trans_assoc | 1011..1222 | CDD:399489 | 29/210 (14%) | ||
Ion_trans | 1226..1498 | CDD:395416 | 94/294 (32%) | ||
Na_channel_gate | 1490..1542 | CDD:240441 | 11/55 (20%) | ||
Ion_trans | 1547..1802 | CDD:395416 | 84/260 (32%) | ||
GPHH | 1814..1861 | CDD:407139 | 18/51 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |