Sequence 1: | NP_001356945.1 | Gene: | cac / 32158 | FlyBaseID: | FBgn0263111 | Length: | 2110 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826714.1 | Gene: | scn3a / 100125099 | XenbaseID: | XB-GENE-5812330 | Length: | 2019 | Species: | Xenopus tropicalis |
Alignment Length: | 1999 | Identity: | 498/1999 - (24%) |
---|---|---|---|
Similarity: | 817/1999 - (40%) | Gaps: | 556/1999 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 TSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKTEAYF 80
Fly 81 LCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRTLRAIRVLRP 145
Fly 146 LKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLEFYSGALHKTCYSLE---DPNK 207
Fly 208 LVKEGESET----------PCNTDN-ILEKATGSF--------VCNNTTS--------MCLEKWE 245
Fly 246 GPNSGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLG 310
Fly 311 VLSGEFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILA----------------- 358
Fly 359 ------EERTTEEEKMHIMEAR-RRNAAKRKKLKSLGKSKSTDTE-------------------- 396
Fly 397 --------------------------------------------EEEAEEDYGDD---------- 407
Fly 408 ---------------------------------------------GYLKTRSKPQG--------- 418
Fly 419 ----------------------------------------------------------------S 419
Fly 420 CTGFW-RAEKRFRFW--------IRHTVKTQWFYWFV----IVLVFLNTVCVAVEHYGQPSFLTE 471
Fly 472 FLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLR 536
Fly 537 ALRLLRIFKVTKYWSSLRNLVISLLNSMRSIISLLFLLFLFILIFALLGMQLFGGQFN------L 595
Fly 596 PGG--TPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAQKGMIYSIYFIVLVLFGNYTL 658
Fly 659 LNVFLAIAV-----DNLA----------------------------------NA--QELTAAEEE 682
Fly 683 QVEEDKEKQLQ---------ELEKEMEALQADG--VHVENGDG---------------------- 714
Fly 715 ------AVAPSKSKGKKKEE-----------EKKEEEEVTEG------------PKPMLPYSSMF 750
Fly 751 ILSPTNP-----------------------------IRRGAHWVVNLPYFDFFIMVVISMSSIAL 786
Fly 787 AAEDPVRENSRRNK-ILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAA 850
Fly 851 VSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQ 915
Fly 916 FIFSVIGVQLFNGKFFYC---TDE------SKHTSAECQGSYFKYEEDELLPKQELRVWKPRAFH 971
Fly 972 YDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVNIFV 1036
Fly 1037 ALIIITFQEQ-----GEAELQDGEIDKNQKSCIDF--TIGARPLERYMPKNRNTFKYKVWRIVVS 1094
Fly 1095 TPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKIIGFGVKNFFKDPW 1159
Fly 1160 NIFDLITVLGSIV-----DALWMEFGSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFK 1219
Fly 1220 ALPYVCLLIAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFIQGVMLLFRCATGEAWPNIM 1284
Fly 1285 LACLKGKA--CDDDAEKAPGEY---CGS-TLAYAYFVSFIFFCSFLMLNLFVAVIMDNFDYLTRD 1343
Fly 1344 SS-ILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMP 1407
Fly 1408 LDDELRVQFTTTLFALIRENLSIKMRAPEEMDQADMELRETITNIWPLQAKKMLNLLVPPSDQLN 1472
Fly 1473 KGKLSVGKI----------YAGFLILESWR--STRFGQLDSGMPMLELQDASRHPSQESLTGADA 1525
Fly 1526 GHLHPGHSY----MNGHRRSPSLRHNGSPLARSP-------SPRRRGHQ 1563 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cac | NP_001356945.1 | Ion_trans | 37..324 | CDD:334124 | 92/316 (29%) |
Ion_trans | 441..677 | CDD:334124 | 90/288 (31%) | ||
Ion_trans | 769..1050 | CDD:334124 | 92/295 (31%) | ||
Ion_trans | 1094..1345 | CDD:334124 | 84/261 (32%) | ||
GPHH | 1346..1416 | CDD:339854 | 22/69 (32%) | ||
Ca_chan_IQ | 1418..1492 | CDD:337190 | 17/83 (20%) | ||
scn3a | XP_012826714.1 | Ion_trans | 151..430 | CDD:278921 | 87/292 (30%) |
Na_trans_cytopl | 512..627 | CDD:288761 | 6/114 (5%) | ||
Ion_trans | 786..982 | CDD:278921 | 72/204 (35%) | ||
Na_trans_assoc | 1008..1216 | CDD:284034 | 29/213 (14%) | ||
Ion_trans | 1239..1496 | CDD:278921 | 83/272 (31%) | ||
Na_channel_gate | 1488..1540 | CDD:240441 | 12/55 (22%) | ||
Ion_trans | 1562..1800 | CDD:278921 | 77/242 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |