Protein Alignment Sclp and lrrc20

DIOPT Version :10

• Sequence 1: NP_001259475.1
• Gene: Sclp / 32156
• FlyBaseID: FBgn0030357
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: XP_021335730.1
• Gene: lrrc20 / 492485
• ZFINID: ZDB-GENE-041114-49
• Length: 201
• Species: Danio rerio
• Alignment Length: 191
• Identity: 57/191 - (29%)
• Similarity: 92/191 - (48%)
• Gaps: 18/191 - (9%)

  Fly    55 DPSIPPHIARIGGIVTCPPIAGQGVIRVVQRCEDAKENHK--LDLSSCELMQIPDAVYHLMR--N 115
            ||...|.|:    |...|....|.|.:|.:|..|..|..:  ||||.|.|:..||.|:.::|  :
Zfish    14 DPPTAPQIS----IRPEPNRMAQAVAKVARRINDTMEEGRDSLDLSDCGLISFPDGVFKMIRSCS 74

  Fly   116 TELITCNLSGNVLKSVSPKFSQKFSTITDLNLSHNKLSRLPEEFASLSALTKLNISNNSFIVLPQ 180
            ..:...:|:.|.:|::|.||...|:.:.:|:|..|.|:.||:.......|..:|||.|:..|.|:
Zfish    75 ENIHKISLADNQIKALSNKFFLTFTQLRELDLQGNVLTTLPDAIGEAQHLQIINISRNNLSVFPE 139

  Fly   181 VVFKLQSLASLDAQNNAILEIDTDEAITSDNLA------LVDLRNNPLSRNCRRKLQSFKT 235
            .:..::||..:..:.|.|.....|:...|.:..      .:|||.  |.|:  |:||..:|
Zfish   140 RLTDVKSLKQISVEENQITASTWDKRTASLSFMKQKFQNSLDLRR--LGRS--RRLQCERT 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sclp	NP_001259475.1	LRR	<93..>223	CDD:443914	39/139 (28%)
		leucine-rich repeat	93..115	CDD:275380	10/25 (40%)
		leucine-rich repeat	116..141	CDD:275380	7/24 (29%)
		leucine-rich repeat	142..164	CDD:275380	6/21 (29%)
		leucine-rich repeat	165..187	CDD:275380	7/21 (33%)
		leucine-rich repeat	188..211	CDD:275380	5/22 (23%)
lrrc20	XP_021335730.1	LRR	<51..>158	CDD:443914	33/106 (31%)
		leucine-rich repeat	51..76	CDD:275378	10/24 (42%)
		leucine-rich repeat	77..100	CDD:275378	7/22 (32%)
		leucine-rich repeat	101..123	CDD:275378	6/21 (29%)
		leucine-rich repeat	124..146	CDD:275378	7/21 (33%)
		leucine-rich repeat	147..158	CDD:275378	2/10 (20%)