DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment smyhc1 and zip

DIOPT Version :9

Sequence 1:NP_001018343.1 Gene:smyhc1 / 321552 ZFINID:ZDB-GENE-030131-271 Length:1938 Species:Danio rerio
Sequence 2:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster


Alignment Length:1947 Identity:746/1947 - (38%)
Similarity:1177/1947 - (60%) Gaps:60/1947 - (3%)


- Green bases have known domain annotations that are detailed below.


Zfish    34 KKECFVPDPEVEYVKASITSRDGDKVTVD-TEYGKTLTFKECDVHPQNPPKFDKIEDMAMFTFLH 97
            |:..:||.....:|.|||....||:|.|: .|.||.:.....|:...|||||||:||||..|.|:
  Fly    79 KRLVWVPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQKMNPPKFDKVEDMAELTCLN 143

Zfish    98 EPAVLFNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYDSSVVKAYRGKKRTEAPPHIFSISDNAY 162
            |.:||.|:|:||.:.:||||||||||.|||||.||:|...:::.|:|.||.|.|||:|:|:|:||
  Fly   144 EASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVPPHVFAITDSAY 208

Zfish   163 QYMLSDRENQSVLITGESGAGKTVNTKRVIQYFASIAAVSGKKDAA------------------- 208
            :.||.|||:||:|.|||||||||.|||:|||:.|.:||...|...|                   
  Fly   209 RNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTNKYIK 273

Zfish   209 -------------------------SEKKGTLEDQIIQANPALEAFGNAKTIRNDNSSRFGKFIR 248
                                     :.::|.||.|::||||.|||||||||::||||||||||||
  Fly   274 VKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIR 338

Zfish   249 IHFGVSGKLASADIETYLLEKSRVTYQLKAERDYHIFYQILSQKKPELLEMLLITNNPYDYSYIS 313
            |:|..||.::.|:||||||||||...|.|.||.:|||||:|:...||..|..:: ::...|:::|
  Fly   339 INFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFIL-DDVKSYAFLS 402

Zfish   314 QGETQVASIDDAEELIATDDAFDVLGFTQDEKSGIYKLTGAIMHFGNMKFKQKQREEQAEADGTE 378
            .|...|..:||..|..||..:.:::|.|.::.:.|:::..|::.||:|||:|::..:||......
  Fly   403 NGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQATLPDNT 467

Zfish   379 DADKVAYLMGLNSADLIKGLCHPRVKVGNEWVTKGQNVQQVYYSIGALAKSVYEKMFLWMVVRIN 443
            .|.|:|:|:||:..|:.:....||:|||.::|||.|..:||.:::.|:||:.||:||.|:|.|||
  Fly   468 VAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKACYERMFKWLVNRIN 532

Zfish   444 QSLD-TKQPRQYFIGVLDIAGFEIFDFNTFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIDW 507
            :||| ||:....|||:||:||||||:.|:|||||||:|||||||.|||.||:||||||::|||:|
  Fly   533 RSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW 597

Zfish   508 EFIDFGMDLQACIELIEKPMGIMSILEEECMFPKASDQTFKAKLYDNHLGKNPTFQKPRIVKGRP 572
            :|||||:|||..|:||:||.|||::|:|||.||||:|:||..||...| ..:|.|.|...   |.
  Fly   598 KFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTFVDKLVSAH-SMHPKFMKTDF---RG 658

Zfish   573 EAHFALVHYAGTVDYNISNWLVKNKDPLNETVVGLFQKSTVKLLSFLFAGYSGADSAQDS-KGGK 636
            .|.||:|||||.|||:.:.||:||.|||||.:|.|.|.|....:..::........||.: ...:
  Fly   659 VADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQALTDTQ 723

Zfish   637 GGGKKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCLIPNETKTPGAMENPLVMHQLRCNGVL 701
            .|.:.:...|:|||.|::|.|.|||..||:|:|:||||:|||..|..|.::.|||:.||||||||
  Fly   724 FGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVL 788

Zfish   702 EGIRICRKGFPNRILYGDFKQRYRILNPSANPEGQFIDNKKAAEKLLGSLDIDHNQYKLGHTKVF 766
            |||||||:||||||.:.:|:|||.:|.|:..|:| |:|.|||.||::.:|::|.|.|::|.:|:|
  Fly   789 EGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKG-FMDGKKACEKMIQALELDSNLYRVGQSKIF 852

Zfish   767 FKAGLLGTLEEMRDDRLALIITGIQARARGILSRLEFQKIVERRDSLLVIQWNVRAFMGVKNWPW 831
            |:||:|..|||.||.:::.:|...||..||.|:|..:||.:::.:::.:||.|..|::.::||.|
  Fly   853 FRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCAAYLKLRNWQW 917

Zfish   832 MKLYFKIKPLLKTAETEKEMANMKEEFTKLKEAYAKSEARKKELEEKMVSLLQEKNDLQLAVQSE 896
            .:||.|:||||:..:.|:::...::|..:::|.........:|.|.|....|.||..|...:|:|
  Fly   918 WRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAE 982

Zfish   897 QDNLVDAEERCEGLIKSKIQLEAKAKELTERLEDEEEMNAELVAKKRKLEDECSELKKDIDDLEL 961
            .:...:|||....|:..|.:||...:||..|:|:|||....|..:|:|||....:|::.:::.|.
  Fly   983 IELCAEAEESRSRLMARKQELEDMMQELETRIEEEEERVLALGGEKKKLELNIQDLEEQLEEEEA 1047

Zfish   962 TLAKVEKEKHATENKVKNLTEEMAALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDKVNTLTKAK 1026
            ...|::.||...:.|:|...|::|..|:...||.||||.|:|........|..||:|...|.|.|
  Fly  1048 ARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLKEKKLLEERANDLSQTLAEEEEKAKHLAKLK 1112

Zfish  1027 AKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLTQESIMDLENDKQQMEEKLKKKDFEISQ 1091
            ||.|..:.:||..|.::::.|.:.:|:|||:|.::...:|.:.:......:|:.:|.|::.|::|
  Fly  1113 AKHEATISELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERRVQVDEMQAQLAKREEELTQ 1177

Zfish  1092 LNSKIEDEQALGAQLQKKLKELQARIEELEEELEAERAARAKVEKQRADLSRELEEISERLEEAG 1156
            ...:|::|.|..|..||..:||::::.|::|:||||:|||||.||.|.|||.|||.:...|.::.
  Fly  1178 TLLRIDEESATKATAQKAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSL 1242

Zfish  1157 GATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATLRKKHADSVADLGEQIDNLQRVKQKLEK 1221
            ..||||.|:..|||.|...|::.|||.|:.||...|.:|.||:..:..:.:|::||::.|..|||
  Fly  1243 DTTAAQQELRSKREQELATLKKSLEEETVNHEGVLADMRHKHSQELNSINDQLENLRKAKTVLEK 1307

Zfish  1222 EKSELKLELDDVVSNMEQIVKSKSNLEKMCRTLEDQMSEYRTKAEEGQRTINDFTMQKAKLQTEN 1286
            .|..|:.|..|:.:.:..:..|:...::..:..|.|::|.:.|..|.:|..::...:..|||.|.
  Fly  1308 AKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIERARSELQEKCTKLQQEA 1372

Zfish  1287 GELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEEEVKAKNALAHAVQSARHDSDLLREQFEE 1351
            ..::.||||.:...|...:...:...|:.:.::.||||.:.|..|:..::....:.:.|:||.||
  Fly  1373 ENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEE 1437

Zfish  1352 EQEAKAELQRSLSKTNSEVAQWRTKYETDAIQRTEELEDAKKKLAQRLQEAEEAVEAVNAKCSSL 1416
            :.|||...:|.|::..:::.:.:.|.|.|| ...:|||:.||:|.:.::..|..|:.:.|:...|
  Fly  1438 DDEAKRNYERKLAEVTTQMQEIKKKAEEDA-DLAKELEEGKKRLNKDIEALERQVKELIAQNDRL 1501

Zfish  1417 EKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKVLAEWKQKYEESQTELESAQKESRSLST 1481
            :|:|.::|:|:||..:::|........|:|||:||||:|||.|...|:...|.::|::|:|...|
  Fly  1502 DKSKKKIQSELEDATIELEAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAEREAREKET 1566

Zfish  1482 ELFKLKNSYEEVLDQLETMKRENKNLQEEISDLTEQLGETGKSIHELEKIRKQLEQEKAEIQTAL 1546
            ::..:....:|..|::|.::.:.|.||.|:.||....|...|::|||||.::.||.:.||::...
  Fly  1567 KVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQN 1631

Zfish  1547 EEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEEMEQAKRNQQRVVDTLQSSLESETRSRN 1611
            ||.|..|:..|...||.::....:::..||.|..|:|..|:.:|...:.:..|::.|:.|.:.|.
  Fly  1632 EELEDDLQLTEDAKLRLEVNMQALRSQFERDLLAKEEGAEEKRRGLVKQLRDLETELDEERKQRT 1696

Zfish  1612 EALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKGLHGHVKDSQMQLDDALRGNDDLKENIAIV 1676
            .|:..|||:||||.|:|..:...|:...:|.|..|.|...|||:....::|....::|:......
  Fly  1697 AAVASKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVKDALRDAEEAKAAKEELQALSKEA 1761

Zfish  1677 ERRNNLLQAELDELRSLVEQTERGRKLAEQELMDVSERVQLLHAQNTSLLNQKKKLEGDNTQLQT 1741
            ||:...|:||:.:|...:..:||.|:.||.|..:::|.:.....:.:.::::|::||.....|:.
  Fly  1762 ERKVKALEAEVLQLTEDLASSERARRAAETERDELAEEIANNANKGSLMIDEKRRLEARIATLEE 1826

Zfish  1742 EVEEAVQECRNAE---EKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAE 1803
            |:||   |..|:|   ::::||......:..||..|:..|...|..:..:|:..|:|:.:|.|.|
  Fly  1827 ELEE---EQSNSEVLLDRSRKAQLQIEQLTTELANEKSNSQKNENGRALLERQNKELKAKLAEIE 1888

Zfish  1804 QIAMKGGKKQVQKLEARVRELENEVELEQRKASESVKGVRKYERRIKELTYQTEEDRKNLARLQD 1868
            .......|..:..|||::..||.::|.|.::.....|..||.:::|||||...|::|:::.:.::
  Fly  1889 TAQRTKVKATIATLEAKIANLEEQLENEGKERLLQQKANRKMDKKIKELTMNIEDERRHVDQHKE 1953

Zfish  1869 LVDKLQLKVKSYKRAAEEAEEQANSNLGKFRKLQHELDEAEERADIAESQVNKMRAKSRDSG 1930
            .:|||..::|..||..:|.||:......:.||.|.|.::..|..:....::|.::.|.|.:|
  Fly  1954 QMDKLNSRIKLLKRNLDETEEELQKEKTQKRKYQRECEDMIESQEAMNREINSLKTKLRRTG 2015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smyhc1NP_001018343.1 Myosin_N 35..72 CDD:280832 13/37 (35%)
Myosin_head 87..768 CDD:278492 356/726 (49%)
MYSc_class_II 99..768 CDD:276951 349/714 (49%)
Myosin_tail_1 848..1925 CDD:279860 333/1079 (31%)
RILP-like 963..1096 CDD:304877 41/132 (31%)
COG6 1374..>1507 CDD:303003 43/132 (33%)
TMPIT 1457..>1562 CDD:285135 33/104 (32%)
zipNP_523860.2 Myosin_N 80..117 CDD:280832 13/36 (36%)
Myosin_head 133..854 CDD:278492 356/726 (49%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 349/714 (49%)
Myosin_tail_1 931..2011 CDD:279860 333/1083 (31%)
Prefoldin 1431..1515 CDD:298833 29/84 (35%)
FAM76 <1847..1926 CDD:292665 19/78 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100110
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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