Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001322185.1 | Gene: | AT1G16800 / 838251 | AraportID: | AT1G16800 | Length: | 2226 | Species: | Arabidopsis thaliana |
Alignment Length: | 1228 | Identity: | 276/1228 - (22%) |
---|---|---|---|
Similarity: | 434/1228 - (35%) | Gaps: | 431/1228 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 APSSALS----FLDMDD----------NELLPGAD----TQPT------QYDYRDFTMPSTSQSQ 47
Fly 48 TQNDQLEIAQRCSAGDSHPRLASITN-----------------DLADLQFEEEDDEPGSS-YVKE 94
Fly 95 LPP-------------HACKYCGIHDPATVVMCNNCRKWF--CNGRGSTSGSH------------ 132
Fly 133 --IINH---------LVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIPAKADSVVVLLC 186
Fly 187 RQPCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQISAAQINKLEELWKENIE 251
Fly 252 ATFQDLEKPGIDSEP----------AHVLLRYEDGYQYEKTFGPLV--RLEAEYDQKLKESATQE 304
Fly 305 NIE-----------------VRW----DVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELY 348
Fly 349 NPWSEIGHVIKVPDNFGDD--------VGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALC 405
Fly 406 KF----AIDRNSVSNFIYSRLLGHGRADSN--DEVLFRGPQPKLFSAPH------LPDLNRSQVY 458
Fly 459 AVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLV------------------------- 491
Fly 492 --------------------------------KLHGGTVLVCAPSNTAVDQLTEKIHRTNL---- 520
Fly 521 ------KVVRVC-------------------------------AKSREAIDSPVSFLALHNQIRN 548
Fly 549 METNSELKKL----------------QQLKDETGELSS--------------------------A 571
Fly 572 DEKR----YRNLKRAAENQLLEAADVICCTCVGAGDGRLSRV-----------------KFTSIL 615
Fly 616 IDESMQSTEPECMVPVVL----GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 676
Fly 677 FRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPER--P-MFFLVTQGQEEIA 738
Fly 739 GSGTSFLNRTEA-ANVEKITTRFLKAGIKPE----QIGIITPYEGQRAYLVQYMQYQGSLHSRLY 798
Fly 799 QEIEIASVDAFQGREKDIIIMSCVRSN-------ERQGIGFLNDPRRLNVALTRAKFGIIIVGNP 856
Fly 857 KVLAKQQLWNHLLNFYKDRKVLV----------------EGSLNNLKESLIHFQKPKK 898 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | 28/175 (16%) |
DNA2 | 122..897 | CDD:224037 | 238/1053 (23%) | ||
Mis12 | 210..299 | CDD:283509 | 19/100 (19%) | ||
AAA_19 | 458..>515 | CDD:289986 | 29/120 (24%) | ||
AAA_12 | 661..857 | CDD:289832 | 79/210 (38%) | ||
AT1G16800 | NP_001322185.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D62494at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000219 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |