| Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017175214.1 | Gene: | Zgrf1 / 71643 | MGIID: | 1918893 | Length: | 2044 | Species: | Mus musculus |
| Alignment Length: | 494 | Identity: | 151/494 - (30%) |
|---|---|---|---|
| Similarity: | 236/494 - (47%) | Gaps: | 84/494 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 462 HALQRPLSLIQGPPGTGKTVTSATIVYQLVKL----HGGT--------VLVCAPSNTAVDQLT-- 512
Fly 513 ------EKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSA 571
Fly 572 D----EKRYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVV 632
Fly 633 -LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVL----------------------- 672
Fly 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERP--MFFLVTQGQE 735
Fly 736 EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQE 800
Fly 801 IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLW 865
Fly 866 NHLLNFYKDRK------VLVEGSLNNLKESLIHFQKPKK 898 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
| DNA2 | 122..897 | CDD:224037 | 150/491 (31%) | ||
| Mis12 | 210..299 | CDD:283509 | |||
| AAA_19 | 458..>515 | CDD:289986 | 22/72 (31%) | ||
| AAA_12 | 661..857 | CDD:289832 | 72/220 (33%) | ||
| Zgrf1 | XP_017175214.1 | DUF2439 | 3..75 | CDD:371019 | |
| zf-GRF | 1267..1311 | CDD:284302 | |||
| TIGR00376 | <1568..2003 | CDD:273041 | 143/459 (31%) | ||
| AAA_12 | 1774..1981 | CDD:372468 | 71/218 (33%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D62494at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||