Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_699251.2 | Gene: | helz2b / 570654 | ZFINID: | ZDB-GENE-070912-617 | Length: | 2781 | Species: | Danio rerio |
Alignment Length: | 838 | Identity: | 212/838 - (25%) |
---|---|---|---|
Similarity: | 330/838 - (39%) | Gaps: | 193/838 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 191 AAQNSLKDMNWDQ----------------------EQWKPLIADRCFLAWLVKQPSEQGQLRARQ 233
Fly 234 IS-----AAQINKLEE----LW---------KENIEATFQDLEKP-----GIDSEPAHVLLRYED 275
Fly 276 GYQYEKTFGPLVRLEAEYDQKLKESATQ---------ENIEVRWD------------VGLNKKTI 319
Fly 320 AY------FTLAKTDSDMKLMHGDELRLHYVGELYNPWSEIGHVIKV-----PDNFGDD---VGL 370
Fly 371 ELK-SSTNAP-VKCTSNFTVDFIWKCTSFDRMTRALCKFAIDRNSVSNF-IYSRLLGHGRADSND 432
Fly 433 EV----LFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKL 493
Fly 494 HG---------------GTVLVCAPSNTAVDQLTEKIHR--TNLKVVRVCAKSREAIDSPV--SF 539
Fly 540 LALHNQIRNMETNSELKKL---------------------QQLKDETGELSSADEKRYRNLKRAA 583
Fly 584 ENQLLEAADVICCTCVGAGDGRLSR-VKFTSILIDESMQSTEPECMVPVV-LGAKQLILVGDHCQ 646
Fly 647 LGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Fly 712 RLKLDFPWPQPERPMFFLVTQGQE------EIAGSGTSFLNRTEAANVEKITTRFLKAG-IKPEQ 769
Fly 770 IGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVR---SNE----- 826
Fly 827 -----RQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLV 879 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | 16/97 (16%) |
DNA2 | 122..897 | CDD:224037 | 212/838 (25%) | ||
Mis12 | 210..299 | CDD:283509 | 19/111 (17%) | ||
AAA_19 | 458..>515 | CDD:289986 | 27/71 (38%) | ||
AAA_12 | 661..857 | CDD:289832 | 61/215 (28%) | ||
helz2b | XP_699251.2 | AAA_11 | 530..725 | CDD:289831 | |
AAA | 553..688 | CDD:99707 | |||
DNA2 | <647..959 | CDD:224037 | |||
P-loop_NTPase | <662..>721 | CDD:304359 | |||
UvrD_C_2 | 735..935 | CDD:304668 | |||
RNB | 1255..1482 | CDD:279157 | |||
RNB | 1544..1845 | CDD:214935 | |||
AAA_11 | 2289..2532 | CDD:289831 | 76/242 (31%) | ||
AAA_19 | 2297..>2368 | CDD:289986 | 27/70 (39%) | ||
AAA_12 | 2543..2746 | CDD:289832 | 59/211 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |